Gilvimarinus sp. DA14: NHM04_05125
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Entry
NHM04_05125 CDS
T08272
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gil
Gilvimarinus sp. DA14
Pathway
gil03030
DNA replication
gil03430
Mismatch repair
gil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NHM04_05125 (dnaX)
03430 Mismatch repair
NHM04_05125 (dnaX)
03440 Homologous recombination
NHM04_05125 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gil03032
]
NHM04_05125 (dnaX)
03400 DNA repair and recombination proteins [BR:
gil03400
]
NHM04_05125 (dnaX)
Enzymes [BR:
gil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NHM04_05125 (dnaX)
DNA replication proteins [BR:
gil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NHM04_05125 (dnaX)
DNA repair and recombination proteins [BR:
gil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NHM04_05125 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_30
AAA_2
AAA_19
AAA_18
AAA_14
PIF1
Rad17
nSTAND3
TsaE
SKI
AAA_7
Mg_chelatase
Herpes_Helicase
AAA_28
AAA_24
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
UTF61184
UniProt:
A0A9J7AA04
LinkDB
All DBs
Position
complement(1160868..1162961)
Genome browser
AA seq
697 aa
AA seq
DB search
MSYQVLARKWRPRTFRDLVGQEHVLRALVNALDHDRLHHAYLFTGTRGVGKTTIARILAK
CLNCEVGVSSTPCGQCAACVEIAENRFVDLIEVDAASRTKVEDTRELLENVQYAPTRGRY
KVYLIDEVHMLSTHSFNALLKTLEEPPPHVKFLLATTDPQRLPVTILSRCLQFNLKNMTP
ELITGHLQHVLETEVVPFEESALWQLGRAADGSMRDALSLTDQAIAFGSGKVVEAEVRAM
LGTIDRSAVYDILRALVAGDGKAVLDAVAQMAEHAPDFGAALADLLSILHRIAIAQALPE
AVDNSQGDRDQVLKLATELPPEDVQLFYQTGLLGRRDLPLAPEPRAGLEMVLLRMLAFRP
QGVTDIPTRRLSSGQAGAQTENAQAAPPPARQAEPVSAAPSQAPSEHQEPQAQVQATPPE
PSPQVEPNTPPAPAEAPRPAPEVSEPANHQAAAEQKPAAQPSPAAGPAAAVNEAPPFADE
PPPWDEAPDNLVDQDYPEAGATAPEANPPAQASSPMAAVERVLQETSAPPPEQAQAEPPV
QPQASGASHPAGEAQLKPQAPIEKVALEETAPHSWPQIFLGLDVGGVTKNIAANCELIGR
QGNQLHFILDENNSSLFGDGQQQRLADTLTDYYGEPVKVMIQPGAVNTETPAQIAARKRS
ERLAEAVEAVKSDPIVQQLVKHFAAELNLESVQPVDP
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttctcgcacgcaagtggcgcccccgtacgtttcgcgatttagtgggg
caagagcatgtgctgagggctctggtaaacgcgctggatcacgaccgactgcaccacgcc
tacctgtttaccggcacccgtggggtgggtaaaaccaccatcgcccgtattcttgccaaa
tgtttgaactgcgaagtgggtgttagctccacaccctgcggccaatgcgcggcctgtgtt
gagattgccgaaaaccgatttgtggatttgattgaggtggacgccgccagtcgcaccaag
gttgaagacactcgcgagctgttggagaacgttcagtacgcgccgactcgtggccgctat
aaagtgtacctgatcgatgaggtgcacatgctctcaacccactctttcaacgccctgtta
aaaaccctggaagagccaccgccgcacgttaaatttttgctggccaccaccgacccccag
cgtttgccggtgacgattctttcccgctgtttgcagtttaatttaaagaacatgaccccc
gagctgattaccgggcatctgcaacatgtgctggaaaccgaagtcgtgccctttgaagag
agcgccctgtggcaattgggccgggctgccgatggcagtatgcgcgatgccttgagtctg
accgaccaggccattgcctttggctctggcaaggtggttgaagccgaagtgcgtgccatg
ttgggcaccattgatcgcagtgcggtctacgatattttgcgcgctctggtagcaggtgac
ggcaaggccgtactggatgctgtggcgcaaatggccgagcatgcgccggattttggcgct
gcgctggccgatttactgtccatattgcaccgcattgctatcgctcaggcgctgcccgag
gcggtagacaacagccagggcgatcgcgatcaggtgttaaagctcgccactgaattacca
ccggaagacgtgcaactcttttaccaaacgggtctattggggcggcgcgatttacctttg
gcccccgagccccgcgcgggcttggaaatggtgctgctgcgcatgctggctttcaggccg
caaggggtgactgatattcccacgcgccgtttgtcgagcggccaggctggggcgcaaacc
gagaatgcgcaagccgcgccaccgccggctcggcaggccgaacctgtgtcggcggcgcca
agccaagcgccaagcgagcaccaagagccgcaggctcaggtacaagccacgccgcctgaa
ccttcacctcaagttgaacccaatacgccaccggccccggcagaagcgccaagaccagcc
cccgaggtcagtgagcctgcgaatcatcaagccgcagcagagcaaaagccagctgcgcag
cccagccctgcagccgggcccgccgctgccgtcaacgaagcgccgccctttgccgatgaa
cccccaccctgggatgaggcgccggataatcttgttgaccaggattatccagaagccggg
gccacagcgcccgaggcgaatcctccggcccaagcatccagcccaatggcggcggtagag
cgggttttgcaagaaacctctgcacccccacccgaacaggctcaagctgaaccgccagtg
cagcctcaagcttcaggggcgtcgcaccctgcaggagaggctcaattaaagccccaggca
cctatcgaaaaagtcgcccttgaggagaccgcacctcacagctggccgcagattttcctc
ggcttggatgtaggcggggtcaccaaaaacattgccgccaactgtgagttaatcggcagg
cagggtaatcagctgcactttattctggatgaaaacaacagcagtttatttggcgatggc
cagcagcagcggttggccgacactttaaccgactactacggcgagccagttaaagtgatg
attcagccgggagcggtgaataccgaaacaccggcgcagatcgccgcgcgcaagcgtagt
gagcgtttggccgaagcggttgaagcggtcaagtctgaccccatagtgcagcaactggta
aaacattttgccgccgagctgaacctggaatcggtacagccggtagatccctaa
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