Gilvimarinus sp. DA14: NHM04_15440
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Entry
NHM04_15440 CDS
T08272
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
gil
Gilvimarinus sp. DA14
Pathway
gil00521
Streptomycin biosynthesis
gil00523
Polyketide sugar unit biosynthesis
gil00541
O-Antigen nucleotide sugar biosynthesis
gil01100
Metabolic pathways
gil01110
Biosynthesis of secondary metabolites
gil01250
Biosynthesis of nucleotide sugars
Module
gil_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NHM04_15440 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NHM04_15440 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NHM04_15440 (rfbC)
Enzymes [BR:
gil01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NHM04_15440 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UTF59844
UniProt:
A0A9J7A690
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All DBs
Position
complement(3508853..3509443)
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AA seq
196 aa
AA seq
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MKITPQAIADVLLIEPKVFGDARGYFFESFRQDIFEAATGYPVNFLQDNESFSARGVLRG
LHYQRAPYAQSKLVRVIQGEVIDVAVDIRVGSPTFGQHVAARLSSDNKHQLFVPRGFAHG
FVVLSETAIFSYKVDNLYAPEHDSGIHFADQDLAIDWGINAQLIQTSDKDRALPSLNEKL
NRDPDSLFRYEHNLYE
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
gtgaagattaccccacaagccattgctgacgttttattaatagagcccaaggtatttggc
gatgcccgaggttattttttcgagtcttttcgtcaagatatttttgaggcggccactggt
tatccagtcaacttcctgcaagacaacgaatctttttcggcgcgcggtgtcctgcgcggc
ttgcattaccagcgcgcaccctacgcacagagcaaactggtgcgggttatccagggcgaa
gtcatcgatgttgcagttgatatccgtgtcggcagcccaacatttggccaacacgttgcc
gcacgcttaagtagcgacaacaagcatcagctatttgtccctcgcggctttgcccatggc
tttgtggtattgagcgagaccgcgattttcagctacaaagtcgataacctttacgccccc
gagcacgacagcggcattcactttgccgatcaggacctggccatcgactggggcataaac
gcgcagctgattcagacttcagacaaagacagagcactgccctctctgaatgaaaaactc
aatcgtgatccggactcactttttcgctacgagcacaatctgtacgagtaa
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