Gimesia benthica: F1728_11500
Help
Entry
F1728_11500 CDS
T06296
Name
(GenBank) hypothetical protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
gim
Gimesia benthica
Pathway
gim00550
Peptidoglycan biosynthesis
gim01100
Metabolic pathways
gim01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F1728_11500
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
F1728_11500
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gim01011
]
F1728_11500
Enzymes [BR:
gim01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
F1728_11500
Peptidoglycan biosynthesis and degradation proteins [BR:
gim01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
F1728_11500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Importin_rep_6
Herpes_UL25
Motif
Other DBs
NCBI-ProteinID:
QGQ23258
UniProt:
A0A6I6AAV3
LinkDB
All DBs
Position
complement(3063246..3065498)
Genome browser
AA seq
750 aa
AA seq
DB search
MRNRLGNDHMTLENEAAGQSFQVDRLPGVRVFLLGLILVVPLLAVSGRLLFIQMMNAEHF
YSQFGKTTESFESIPSRDGRIVSIDGRVLALDVERFDLQAHYRWLEEPPNPRWLKQQALT
LLEPVERRNREKVEAAQEKVLARRQQLWDELAQVMKTSPEDLQTSCRDVQQRVETIIESV
NERAAQKEEASSSDDSDVETQAATEQDQLQKFWTLFKDALTRPPRRPRRERIVVREELDY
HTLASGIPREIALAISAHPERFPGIHIQVATLREYPQKTLAPHEIGVRHRIDEKTLKARQ
QRFPEGDPLDYKEGDRIGKMGVERTYDRYLRGLRGLKKVVRNRQGEIIRTEIIREPKSGD
DVVLTLNTGLQDQVQDLLDESLQELRVGTEEQPAEQTDPAAGGCIVVLDVRTGAIVATAS
APRYDLNLLLHPTPEEWQAVLNDPRRPLFPRATQMMLPPGSTFKALTSIALMESGKVDPD
EPYICRGYLDRPDRHRDYIYRHFGVGHNELTLTRALRESCNVYFFQAARTMGAETIHHWA
DQLGFGKPTGIDIPGERGGHLPDPSPPKSEKKSPWYPGDTLGMAIGQSRLTVTPLQIARL
MAVVANDGEMVVPHLAHSVVPSAESSTTTRQMISYPRRYVSGIHPGTLERVREGLIEVVA
HPRGTGYKTVRLKEISIAGKTGTAETGGGKNDHAWFAGFVPAQRPKYAFAVVIEHGGSGS
RVAGPVAQKLVRAMLDTSLLQPTQPKLQAN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaccgtctcggcaatgatcatatgacactggaaaacgaggccgcgggccagtcg
tttcaggtggatcgtctgcccggcgttcgcgtgtttctgctggggttgattctggtggtc
cccctgctggcggtcagcgggcggttgctgttcattcagatgatgaatgcggaacacttt
tattcgcagttcgggaaaacgacggaatccttcgaaagcataccgagccgtgacgggcgg
atcgtttccattgatggtcgcgtgctggcactcgatgtcgaacgtttcgacctgcaggct
cattaccgctggctggaagagccgccgaatccgaggtggctcaaacagcaggcgttgacg
ctgctcgaaccggtggaacgccgcaaccgtgagaaggttgaggcggcgcaggagaaagtg
ctggcgcgacgacagcagttatgggacgaactggcacaggtgatgaagaccagtcctgaa
gatctgcagacctcatgcagggacgtacaacaacgcgttgagaccattatcgaaagtgtg
aatgagcgcgctgctcaaaaggaagaggcgagttcgtccgacgattctgatgtcgaaacg
caggctgcaacagaacaggatcagctgcagaaattctggacgctgttcaaagatgcctta
acgcggcccccgcggcgtccacggcgtgagaggattgtggtgcgggaagagctggattat
cacacgctggcttccgggattccccgggagattgccctggccatctcggcacatccggag
cggtttccgggcattcatatccaggtggcgacattgcgagagtatccgcagaaaacgctg
gcgcctcacgagattggggttcggcatcgaattgatgagaagacactgaaggctcggcag
cagcggtttccggagggagatccactggattataaggaaggggaccggatcggcaagatg
ggggtcgaacggacctatgaccgttacctgcgcggcctgcggggtttgaaaaaagtggtt
cgcaaccggcagggcgagattatccgtaccgaaattatccgcgagccgaagtcaggcgat
gacgtggtgctgactttgaacacgggtctgcaggaccaggtgcaggacttgctggatgaa
tcactgcaggaactgcgcgtggggaccgaggagcaacctgcggagcagaccgaccccgcg
gccggtggttgtattgtcgtacttgatgttcgtaccggggcgattgtggcgactgcttcc
gcgccgcgctacgatttgaatctgctgctgcatccgactcccgaagagtggcaggctgtg
ctgaatgatccgcgacgtccgctgtttccccgggcgacgcagatgatgctgccccccggt
tcaacgttcaaggcgttgacttcaattgccctcatggaaagtggcaaggtggatcctgac
gaaccttatatctgtcgcgggtatctggatcggcccgatcggcatcgcgactatatctac
aggcactttggcgtgggacataatgaactgactttgacgcgggcgctgcgggaatcgtgt
aacgtttatttcttccaggcggcccggacgatgggagcggagacgattcatcactgggcc
gatcaactcggattcggcaagccgacggggatcgatatcccgggagagcggggcggtcat
ctgcctgatccctcaccgcctaagtctgagaagaaatcgccctggtatcccggggacaca
ctgggcatggccattggtcagtcacgactgacggtgacgcccctgcagattgcgcggctg
atggccgtggtggccaatgacggggaaatggtcgtgcctcatttagcgcatagtgtggtg
ccttccgcggaatcatccacgacaacgcggcagatgatatcgtatccgcgacgttacgtg
agtggtattcatcccggcacgctggaacgggtgcgggaaggtctgatcgaggtggtcgcg
catccacgggggaccggttataaaacggtgcgtctcaaggagatttcgattgccggtaag
acggggactgcagagactgggggcggcaagaacgaccatgcgtggtttgcggggtttgtg
cccgcgcagcgcccgaagtacgcgtttgccgtggtgatcgagcatggcggttcggggagt
cgtgtggcggggccagtggcgcagaagctggtgcgagcgatgctcgataccagcttgctg
cagccaacacaaccgaagttgcaggcgaactga
DBGET
integrated database retrieval system
