Gimesia benthica: F1728_27995
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Entry
F1728_27995 CDS
T06296
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
gim
Gimesia benthica
Pathway
gim00521
Streptomycin biosynthesis
gim00523
Polyketide sugar unit biosynthesis
gim00541
O-Antigen nucleotide sugar biosynthesis
gim01100
Metabolic pathways
gim01110
Biosynthesis of secondary metabolites
gim01250
Biosynthesis of nucleotide sugars
Module
gim_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
F1728_27995 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
F1728_27995 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
F1728_27995 (rfbC)
Enzymes [BR:
gim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
F1728_27995 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QGQ26284
UniProt:
A0A6I6AHV5
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Position
complement(7175992..7176540)
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AA seq
182 aa
AA seq
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MEVEQTGFPGLLVITPRVFSDERGFFKETYQQERYKEAGVDASFVQDNASRSTAGILRGL
HYQIQHPQAKLVHVMKGEILDVCVDLRKNSPTFGQSYSIRLTGENHKQLYVPPGFAHGFY
VISPQVDFVYKCGDYYYPEHDRTLLWNDPELGIDWPLSGEPLLSEKDRRGLPLKECEVFE
SL
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagaacagaccggttttcccgggttactggtgatcaccccccgggtcttttct
gacgaacgtggttttttcaaagaaacgtaccagcaggagcggtacaaggaggctggcgtc
gatgcctcttttgtacaggataatgcatcccgttccacagccggcattctccggggactg
cattaccagattcagcacccccaggccaaactcgtgcatgtcatgaaaggggaaattctg
gacgtctgtgtcgacctgcggaagaattctcccacgttcggccagtcttactctatccgc
ctgacgggcgagaaccacaagcaactctatgtgccccccggttttgcccacggtttttat
gtcatcagcccccaggttgattttgtgtataagtgtggcgattattattaccccgaacac
gatcgaactctgctctggaacgatcccgaactgggaattgactggccgctctcaggcgag
ccactgctctcggagaaagaccgtcgagggctgccgctgaaagaatgtgaagttttcgaa
tcgctatga
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