Gekko japonicus (Schlegel's Japanese gecko): 107106324
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Entry
107106324 CDS
T04299
Symbol
ITGB5
Name
(RefSeq) integrin subunit beta 5
KO
K06588
integrin beta 5
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04145
Phagosome
gja04148
Efferocytosis
gja04510
Focal adhesion
gja04512
ECM-receptor interaction
gja04810
Regulation of actin cytoskeleton
gja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107106324 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107106324 (ITGB5)
04148 Efferocytosis
107106324 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
107106324 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107106324 (ITGB5)
04810 Regulation of actin cytoskeleton
107106324 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gja04131
]
107106324 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gja04515
]
107106324 (ITGB5)
Membrane trafficking [BR:
gja04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
107106324 (ITGB5)
Cell adhesion molecules [BR:
gja04515
]
Integrins
Integrin beta subunits
107106324 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
107106324
NCBI-ProteinID:
XP_015261942
LinkDB
All DBs
Position
Un
AA seq
804 aa
AA seq
DB search
MAPGRGRLPSPAAAYTICLLSSLLHGARGLNVCTRGSATSCEECLLIHPKCAWCFKEEFG
SKKSITSRCDFIENLMVSGCAGHFESTKSSLNIVKNLPLSRKGSSVTHSDVTQIIPQKIS
LNLRPGDPTSFHVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMGKLTSNF
RLGFGSFVDKNISPFSYTAPRYQNNPCTGYKLFPGCVPSFGFRHLLSLTDKVDRFNEEVQ
KQRVSRNRDAPEGGFDAILQAAVCEKEIGWRKEASHLLVFTTDDVPHIALDGKLGGLVQP
HDGHCHLNEANEYTASSQLDYPSLALLGEKLAENNIHLIFAVTKSHYVLYKNLTALIPGT
TVEILYQDSRNIIQLIVKAYNSIRSKVELTVWDSPEDLNLAFTATCQDGLSYPNVRKCGD
LQIGDTVSFEISVEARSCPAENTSHTFTIKPDWFRDTLEVTVTYNCTCGCTKQTEPSSSK
CSGNGTYVCGLCDCDAGHVGAKCECEEGESGNMYQNMCREAEGKRVCSGRGECSCNHCVC
YESEFGKIYGLFCECDDFSCARYKGVLCSGHGECHCGECKCHRGYIGDNCNCSTETDSCV
SNDGQMCSGRGNCICGRCHCTEPGAFGETCEKCPTCPGVCSTKRECIECMLFNSGRLADN
QTCQKHCRDEIITRVDVLKTDDPHSVLCAYPLKDCVMKFTYSELPSGRTNITVLKEPECG
TTPDAMRILLAVVGSTVLLGIILLAIWKLLVTIHDRREFARFQSERSRARYEMASNPLYR
KPISTHSLDATFSKLSRTYNGTVD
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggccccggggagggggcgcctgccttcccccgccgctgcctacacgatctgcctcctc
tcctccttgctccacggtgctcgaggtctcaatgtttgcacgcgtggcagtgctacctcc
tgtgaagaatgcctgctgattcatcccaagtgtgcttggtgctttaaagaggaatttggc
agcaaaaaatcgatcacttcaagatgcgacttcattgaaaacctgatggtcagcggttgt
gcagggcactttgagagcactaaaagcagtctgaatatagtgaagaaccttcctttgagc
agaaaaggctccagtgtgactcattcagatgttacccagataatacctcaaaagatctct
ctcaatctgcggcctggtgacccgacctctttccatgtgcaggttcggcaggtagaggac
taccctgtggatctatattatttgatggatctttccctttccatgaaggatgatctggac
actattcggaacctgggaaccaagctggctgaagagatgggaaagctcaccagcaatttc
cgtcttgggtttgggtctttcgtggacaagaatatctctccgttttcatacacagcgccc
agataccagaacaatccttgcactggttacaagttatttccaggttgtgttccatccttc
ggattccggcaccttttatctctcacggataaagtagaccgtttcaatgaagaagttcag
aaacagagggtttcccgcaatagggatgctccagagggtggctttgatgcaatccttcag
gctgctgtgtgtgagaaggagattgggtggcggaaggaggcttctcacttgctcgtcttc
actacagatgatgtcccacacatagctctggatgggaagctgggtggattggtgcagcca
cacgacgggcactgtcacttgaatgaggccaatgaatataccgcatccagtcagctggac
tatccttctcttgcacttctgggagagaaactagctgagaacaatatccacctaattttt
gcagtcacaaaaagccactatgttctttacaagaaccttacggccttaatccctggaaca
acagtagagattttataccaagactccaggaatattattcaactcatagtcaaggcctat
aatagcattcgttctaaagtagagttaactgtctgggacagtcctgaggatctcaacctt
gcttttacagccacatgtcaggatggtttgtcataccccaacgtcaggaagtgtggtgat
cttcaaataggagacacagtttcctttgaaatatcagtagaagcccggagttgccctgct
gagaatacctcacataccttcacaatcaaaccagactggtttcgggacacactcgaagtg
actgtcacctacaactgcacatgtggatgtacaaaacagactgagccaagcagcagcaag
tgcagcggaaatggcacttatgtgtgtggattatgtgattgtgacgcaggccatgtggga
gccaagtgtgaatgcgaggaaggagagagtgggaacatgtaccagaatatgtgccgtgag
gctgaaggaaaacgtgtctgcagtggccgaggggaatgctcttgtaaccactgtgtctgc
tacgagagtgagtttgggaagatctacgggttattctgtgaatgcgacgacttctcctgt
gcaagatataagggtgttctctgttcaggtcacggagaatgtcattgtggggagtgcaag
tgtcatcgtggctatatcggggacaactgcaactgctcaacagagacggatagttgtgtc
tccaacgatggccagatgtgcagtggacgaggcaactgcatctgtgggagatgtcactgc
acagagcctggtgcctttggagagacttgtgagaaatgccctacctgcccaggtgtctgc
agcactaaaagggaatgcattgagtgcatgctgtttaactcaggaagactggctgataac
caaacctgccaaaaacattgcagggatgagatcattacgcgagtggatgttctcaaaact
gatgacccacactcagtcttatgtgcatatcccttgaaggactgtgtgatgaagttcact
tactcggaactgcccagcgggaggaccaatattaccgtcctcaaggaaccagagtgtggc
acgactcctgatgccatgaggatcttactggcagtggtgggcagcacggtgcttctaggc
atcattctcctggcaatctggaagctgcttgtaacgattcatgaccggcgggaatttgcc
agattccaaagtgaacggtcccgggcaagatatgaaatggcttccaaccctctttaccgc
aagcctatttctacacatagcttagatgccacattcagcaagctcagcagaacctacaat
ggtaccgttgattga
DBGET
integrated database retrieval system
