Gekko japonicus (Schlegel's Japanese gecko): 107114668
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Entry
107114668 CDS
T04299
Symbol
DDX60
Name
(RefSeq) DExD/H-box helicase 60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107114668 (DDX60)
Enzymes [BR:
gja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107114668 (DDX60)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
107114668 (DDX60)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
107114668
NCBI-ProteinID:
XP_015271721
LinkDB
All DBs
Position
Un
AA seq
1737 aa
AA seq
DB search
MASGGERGKRGSSDMFSLGKETEQVTLANVSSKESFYDIQNPELQKCMEEITDLIMEEIP
KAEYVSLLNDYVESEFFLFDGDSLFITCVRELTLQRGQNLHFFYLVERFLLDLTSKGAKY
VIVFFKDAEHIYYRNPDLLSLRTALITHLRNNTETPVYTEFSNCLVSSWQNFLEENYPYF
LIIADEGLDQVQTNFLHICIIHTLSKKINIVLTSGQESDAVRTYGYHIHNAYRQWQFFQQ
HKVKITNLYQTLLAYMKRSSSEATLFLSGYPSLETLATKFQVHAKITSLQKEIEDFRYIV
CIVTCSLILEKYNQENQAFSVKQSKPALTLQEAEDLIRMYCLSVVFLHHMPLSQRAQIRL
MKNTWNEETFVFIQQHKLCESVVLKNLATQTSWKIDFSALPDLSDNLLWKNIAFYYEAEK
HSGFDLDIGTKIKGDYELLWKHITTLLGTFSIGSSFPLRTTTKHFIENKCLTSKGEESKK
TFPNPGLIPITNTLVDAFTGDILTDLPFLKSDDPVVVSLKKQKEFDELLHWHSGRPLSDD
YDRTKGDFCAKDPRALRDRQKLQTFQRFYGQSLEGIQSKTIVTQPDNPKKAYTDAKKSKK
MHKTKAEMIVEENQKRRQAEESRREEXXXXXXXXXATLSVTTEEKIKENLISGMKYLQEF
LKNCQSPSVKCTAEMAALNVCFGMWIECCDKGKISTNFDEAVEVMRLIHSVLINYDDLLK
ETDFQQIGKYLRVLGFDNLAVNLKYLKDLEDTTEKLKRKPSKYAVGIGSSRFQLQYMGHY
LIREERKDPDPRVQHFIPDTWQRELLDIVDHNESAVIVAPTSSGKTYASYYCMEKILRDS
DDGVVVYVAPTKALVNQVWATIDNRFNKALPPGMTVCGVFTRDYRHDALTSQILVTVPQC
LEILLLSPRRQKWAKRIRYVIFDEVHCLGGEIGAEVWEHLLVMIRCPFLALSATISNPKH
LTEWIQSVKRYWQHTEAKLARSSTAVKKVAKGKKGITKQKESYKVKLVVYGERYNDLEKY
VCSLKKDEFAIDHYHPCAALTVDHIEKYGFPLDLSLSPRESILLYDTMVEVRENWPRKHS
LDPEEFFKDKIIITKTEARQYEKQLKEDLEMWIKRGLQNEAKKVLQLLKPQPTCCAEKEM
RTNFPRFVEKLHQMNKLPALFFMFKINAVENWAKEVCQALEKKQENKKIPGSEKEQLLTK
KRKKIEKSLADQKHDKKVSREDDKTITKTAELEDIMDRLEKIAEIPADCTYANDQAVDKE
VLRKIFDRTKFMKNRKELQKLALRGTGYHHASLGVKGRQMVEMLFRMGFLQVVTATGTLA
LGINMPCKSVIFLQNSVYLDALNYRQMSGRAGRRGQDLLGNVFFYDIPLPKIQKLMKSNV
PELRGQFPLTISLILRVMLLASKADDKEDAHAKALSLLKHSLLSFKQPRTLAMLKLYFLF
SLQFLVKEGYVDRDGNTTGFSGLVTHLHYHEPSNIVLVEFLVKGLFHKLCQRSKKGSRLF
SEDVMETLVLVLAHLFGRKYIPAAVVNSQRKFYQSKVFLEDLPEDFAAALHEYNCRIEEN
FGQFLQIVSSMADMKQEYQLPLSELDFSSTEQLESQLASHLTSCSEGRTAVSPFVCLSGN
TDLDLLNAGTVNSVILRTIGITAANLPVLHSKMHDNQGRIMPLNAYILDFYKHGSLAAMA
QDNSLHEGDAYYLLRDFALALKAISVSLRELCDNEDDNVVQAFEQLSEQYWEKLEKS
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggaggagaaagaggaaagagaggttcttcagacatgttcagtctggggaaa
gagacagagcaagtaacgttggctaatgtttcaagcaaagaaagtttttacgatatccaa
aatccagagctacaaaaatgcatggaagagataactgatttaattatggaagaaatacct
aaagcagaatacgtcagtttgctaaatgactatgtggaatcggagttttttctgtttgat
ggtgattcactgttcatcacttgtgtaagagaactaacattacagcgaggacagaatttg
cacttcttttacctcgtggaacgctttctcctggatttaacaagcaaaggagcaaaatat
gtcatcgtttttttcaaggatgcagaacatatatattatagaaatcctgatcttctttct
ttgcgaactgcattgattactcatctgagaaacaacactgaaactcctgtatatactgag
ttttctaactgcttagtcagcagctggcaaaattttctggaagagaactatccatatttc
ttgataatcgctgatgaaggcctggatcaagtgcagaccaattttctccatatatgtatt
attcacactttatcaaagaaaatcaacattgtacttacttcaggacaagaatccgatgca
gtcagaacatatggatatcatatccataatgcataccgtcaatggcagttttttcaacag
cataaagtaaagattacgaatttgtaccaaacattgcttgcatacatgaagagatctagt
tcagaagcaaccctttttctttctggatacccaagtctggaaaccctggcgacaaagttt
caggttcatgcaaaaatcacctcactacagaaggagatagaagatttccgatatattgtc
tgtattgtcacctgttcactgattttggaaaagtacaatcaagaaaaccaagctttttct
gtgaagcagtcaaaacctgcattaactctgcaagaagctgaagacctaataaggatgtat
tgccttagtgtggtttttcttcatcacatgcccctttcacaacgagctcagattagatta
atgaaaaatacatggaatgaagaaactttcgtgttcattcaacagcataaactttgtgaa
tccgttgtgctgaaaaatcttgctactcaaacgtcatggaagattgatttttctgccctt
cctgatttgagtgataatctcttgtggaagaatattgcattttattatgaagctgaaaaa
cattccgggtttgatttggatataggaacaaaaattaaaggagattatgaacttttgtgg
aaacatattacaacactgttgggaacattcagtattggaagttcttttcctctgcgtaca
actactaaacattttattgaaaacaagtgtttaactagcaaaggcgaggaatccaagaag
acatttcctaatccaggattaataccaattacgaataccttagtggatgcatttactgga
gatattttaactgatctgccatttttaaaaagtgatgatccggtggttgtctcattaaaa
aaacagaaagaatttgatgagcttctgcactggcattcagggagacctctcagtgatgat
tatgacaggaccaagggagatttttgtgccaaagacccacgggcgctacgagaccggcaa
aaattgcaaacatttcagcgtttttatgggcagtcactggaaggtatccaatcaaaaaca
attgttactcagccggataacccaaagaaggcttatactgatgccaagaagagcaagaaa
atgcataagacaaaagcagaaatgattgttgaggaaaatcagaaaagaagacaagcggaa
gaaagcagaagagaagagnnnnnnnnnnnnnnnnnnnnnnnnnnngctacactttcagtg
acgactgaagaaaaaattaaagagaatttgatctccggcatgaagtatctacaggaattt
ctgaaaaattgtcaaagtccatctgtgaaatgtactgctgaaatggcagcactgaatgtt
tgctttggcatgtggatagaatgctgtgataaaggtaaaatctccacaaattttgatgaa
gcagttgaagttatgagacttattcactcagtgcttataaattatgatgatttattgaag
gagactgatttccaacagattggcaaataccttagggtccttggatttgacaacttggca
gttaatttaaaatacctcaaggatttggaagatacgacagagaaactgaaaaggaagcct
tcaaagtatgctgttggcattgggtcctctcgctttcagttacagtatatgggtcactat
ctcatacgggaagagagaaaagatcctgatcccagagtgcaacattttattccagataca
tggcagagggaacttcttgacattgtggatcataatgagtctgcagtaattgttgctcct
acatcatcaggaaaaacatacgcctcttactattgcatggagaaaatcctgagagacagt
gatgatggcgtggttgtgtatgttgcccctacaaaggctcttgtcaatcaagtatgggca
accattgacaatcggtttaacaaagcactgccccccggcatgacagtctgtggtgttttc
acacgagattatcgccatgatgccttaactagtcagatactggtcacagttcctcagtgt
ttagaaatcttacttctgtcgcctcgtcgccaaaagtgggccaaaaggataagatatgtt
atatttgatgaggtccactgtcttggaggtgaaattggtgcagaggtttgggagcatctc
ctagttatgattcgatgtccatttttggctctttctgcaactattagcaacccaaaacat
ctcactgaatggatacagtcagtaaagaggtactggcaacacactgaagctaaactagca
cggagctccacggctgttaagaaagttgcaaaaggaaagaaaggcatcacaaagcaaaag
gaatcatacaaggttaaattagtggtgtatggagagagatacaatgatttagaaaaatat
gtatgttccctgaagaaggatgaatttgctatcgatcactatcatccctgtgctgcactg
actgtagaccatattgagaaatatggcttccccttggacctttcactgtctcctcgagaa
tctattctattgtatgacaccatggtagaagttagagaaaactggccaaggaaacacagt
ctagatcctgaggagttttttaaggacaagattataatcactaagacagaggcaagacag
tatgagaaacagttgaaagaagatctagagatgtggattaaacgtggcctccaaaatgag
gcaaaaaaagtgctgcagctgctcaaacctcaacctacttgctgtgctgaaaaagagatg
agaaccaattttcctcgttttgtggaaaaattacaccagatgaataaattgcctgcgctg
tttttcatgttcaagattaatgcagtggaaaattgggctaaagaagtttgccaggcctta
gagaagaagcaagagaacaagaagatcccaggttctgaaaaagaacaattgttaacaaaa
aaacgaaaaaagattgaaaagtctttggcagatcagaaacatgacaaaaaagtcagccgt
gaagatgacaaaacaataactaagacagctgaacttgaagacataatggatcgccttgag
aagattgctgaaatccctgctgactgcacatatgcaaacgaccaagctgttgataaggag
gttttacgcaagatatttgaccgaacaaaatttatgaaaaatcgcaaagagctacaaaaa
ctggcacttagaggcactgggtaccatcatgcctctttaggggttaaagggaggcaaatg
gtagagatgctgttcaggatgggatttctgcaggtggtgacagccacaggaactttggct
ttgggaatcaacatgccctgcaagtctgtcatttttctacagaattctgtatatttggat
gctctgaactatagacagatgtctggacgtgctggccggcgtggtcaagatttgttggga
aatgtctttttctatgacattccattgcccaaaatacagaagctcatgaaatcgaatgta
cctgaacttcgaggacagtttcctctgacaatctctctgatcttgagagtcatgctcttg
gcttcaaaagcagatgacaaagaggatgcacatgcaaaggctttgtcattactgaagcat
tcacttctgtccttcaaacagcctaggaccctggcaatgttaaagctctattttttattt
tctttacagtttcttgtgaaggagggatatgtggatcgtgatggtaacactacagggttt
tctggacttgtcacccacttgcattatcacgagccttccaatattgtcctggtggaattt
cttgtgaagggcttgtttcacaagctgtgtcagcggagcaagaaagggtcaaggcttttt
tctgaagatgtgatggaaacattagtgctagtattggcacatctttttggaagaaaatac
ataccagctgctgttgtgaattctcaaaggaaattttaccaatcaaaggtgtttcttgaa
gaccttcctgaagattttgctgctgctttgcatgagtacaactgcagaatagaagaaaac
tttgggcagtttctacagatcgtttcttcaatggctgatatgaaacaagaatatcagctt
cccctttcagaacttgatttttcaagtacagaacagcttgagtcccagcttgcatctcat
ctcacgagctgcagtgaaggaaggacagctgtttcaccctttgtgtgcctttcaggaaat
acagaccttgatttattgaacgcgggcactgtcaacagtgtcatactgcgcacaataggt
attactgctgcaaacctaccagtcctccattcaaagatgcatgataatcaaggaagaatt
atgccacttaatgcatacattcttgatttctacaaacacggatctttggcagccatggca
caggataacagcctgcatgaaggagatgcttattatttgctgagagacttcgcccttgcc
cttaaagcaatcagtgtttctttgcgtgaactttgtgacaatgaggatgataatgttgtg
caagcatttgaacaactaagtgaacaatactgggagaaactggagaaatcataa
DBGET
integrated database retrieval system
