Gekko japonicus (Schlegel's Japanese gecko): 107117917
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Entry
107117917 CDS
T04299
Symbol
PDCD11
Name
(RefSeq) programmed cell death 11
KO
K14792
rRNA biogenesis protein RRP5
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gja03009
]
107117917 (PDCD11)
Ribosome biogenesis [BR:
gja03009
]
Eukaryotic type
90S particles
Other 90S particles
107117917 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
Spt6_S1
TPR_14
Suf
TPR_19
Motif
Other DBs
NCBI-GeneID:
107117917
NCBI-ProteinID:
XP_015275588
LinkDB
All DBs
Position
Un
AA seq
1814 aa
AA seq
DB search
MSSIEENFPRGGTQKTTQDGKAAKQPKMDQDNLFKTHEEQTPKRKKTQQDQAKPKKLKTE
KKAVLKTNAKDFELLTSESLTNGMLVLGCLKECNEYELTISLPNGLSGNVQVTRICEAYS
KMLSEQVATDKPVEGLSPLSELFSPGMLLRCAVIDVEKGAEGHRGIQLSINPKDVNKALN
IAALRTGMLLSGCVSSVEDHGYLIDIGVHAAKAFLPRDKAQSYFQSKEKGAELKIGQYLN
CLIDEVKNSGRIIRISINQSEVAAAIATEMQNWTLCSLLPGLVVKAQIQEVTPLGISLSF
LSSFTGVVDSMHLGPKKPRNYSPGHMVKACILSVNPTSKAVRLSLRPVILQPGTQLGHLS
SDRIGTVVAHSRVKSFLKNAGAVFTLDDGTLAFAHLKHLSDTPKSFKPESFKPGSTHKCR
IIDYSPIDDLLLLSLKQRIIDAPFLRYHDIHPGQIVEGTIFALKDFGMQVKVGGHIKGVV
PRLHLADVVLKQPEKKYSVGNTVKSRVLSCNPDTKVLILTLKKILVTSKLPILASYEDAK
PGLVTHGFVVCAREFGCIVKFYNDVKGLVPKNELGLAPITIPQEAFYEGQVVKVIVLKCE
PEQERLLLSFKLTDNALAEDSTGEEVSKKGEVTYETGQVADVKILKKKENGLEVKILPDE
VSAYLPTMHLSDHVTNCRLWWHWLKGNEILHNVVCLHDKEGHITLSRKPAIISAIEGGNV
VKNFSDIQPGLLLTGYVRNIMPYGVFVEFPYGLTGLAPKSAMSDKFVTNTKDHFVIGQTV
IAKVTSIDEEKKRFLLSLKVSDCSSEDSVSESFSLLFQYFKELQEIKSIMSKRDSSSVAQ
KVCELNPGQRLQLVVQEVKADGSVLFSGTGASGLTVESTHRHLGGKKVVMGDQATAVILH
IDSLKSKVYVSLQEELLSPKQKTLTADSQHPAVVQHVASEYAVASLVETGQLIAIPLASH
FNDTFRFDSEKMKVGQSVIVVLKTTEAGDRGLLLALLSSKKRRNMTRRRQESETLEETSA
VVKHSLSLGDMVTGTVKSVRPTFVLVTLYDKLIGNIHASQILDDVPIGSFPTSKLKVGQK
VTARVIGGRDVKTHRYLPISHPYFTQTIPELSIRPRELKGESNTALCPEECNTEEVLKPF
KPGQMVTCFVKKYDTIKKWLEVEITANVRGRVQPLLLSPNTKVLKHAEKYFKKGQTLAAT
VVGSDITETKLSLSLTGVHSLEKGTIVLGYVKKVIPHVGLTITLPFGKTGKASLFHLSDS
FVEQPLEGFSTGQLVKCCVLSNDDNIMEVSLRQSRVNPKSHGKVEDTEIMSLDNVQEGQL
IRGYVTSVTPSGIFFGLSDSVVGRIPLEYITHLFVPDQRICAKFIHIGQLLTAKVLRINK
EENHVELSVLPKDTGRPSIIPESLGLPHSEMDTNVKKLKKRKSSESEQKVKRGKKRVRCT
EEDDSGIEVYCREEEEEEKYEKSSKGREVPRLKVSTSFTWEEDLNVLDTTMLRDREQSSS
SEEDEEDTQLTTKKLTRQNKELEKQRAEKELSKLEAALMDPTRQPQSADDFDRLVLGNPD
SSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKVNGWVALLTLENMYGTEEAL
MKVFERAIQYNEPLKVFQQLADIYADSEKYKQADDLYNTMLKRFRQDKSVWVKYTTFLLK
RGLVEAAHRLLPRALKCLPDKEHVDVISKLAQLEFRFGDPEHGKAIFENTLSTYPKRTDI
WSVYIDMMIKHGSQKEVREVFERVIHLSLAPKKMKFFFKRYLEYEKKYGTAETVQAVKAA
ALEYVESKNSLAES
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctatagaagagaacttccctcgagggggcacccagaagacaacacaagatgga
aaagcagccaaacagccaaaaatggatcaggataatttattcaaaacacatgaagagcaa
actccgaaaagaaagaaaacccagcaagatcaagcaaaaccaaaaaaactcaagacagag
aagaaagcagttttaaaaaccaatgcaaaggattttgaacttctgacatctgagtctctc
actaatggaatgctggtcttgggctgtctgaaagagtgtaatgagtatgagcttacaatc
agcttaccaaatgggctttctggaaatgtacaggtgacacgcatatgtgaggcttacagc
aaaatgctgagtgagcaggtggccacagataagccagtagagggcttgagcccgctttca
gagctgttctcacctggaatgcttctcagatgtgctgtgattgatgtggagaagggtgcg
gaaggacatcgtggtatacagctgtcaattaatcccaaagatgtcaacaaggctttgaac
attgcagctctgagaacaggcatgctgctctctggatgtgtctctagtgtggaagatcat
ggctaccttattgacataggggtgcatgcagcaaaagcatttctccctcgagataaagcc
caaagttacttccagtcaaaagagaaaggagctgaactgaagataggacaatacttaaac
tgccttattgatgaagtcaagaacagtgggaggataatccgcatttccatcaaccagtca
gaggttgctgccgccattgcaacagaaatgcaaaattggacactctgcagtttgctacct
gggctggtggtgaaagcccagattcaggaggtgactcctttgggaatttctcttagtttt
ttgtcttcctttactggagttgtggactccatgcacctgggtcccaaaaaaccaagaaac
tactctccaggtcatatggtgaaagcctgcattctctctgttaatcccacctccaaggca
gtacgcctttctttgcgcccagttatccttcagcctggcactcagcttggccatctctcc
agtgatcggattggcacagtagtggcccactcaagagtaaagagctttctcaaaaatgct
ggtgctgtcttcacactggatgatggcacccttgcttttgcacatctaaaacatctttca
gatactcccaagtctttcaaacctgagtcctttaagcctggaagcacgcataagtgccga
attattgactacagccctatcgatgatctgttattgttgtccctcaaacaacgtattatt
gatgctccattcttgagataccatgatattcatcctggacagattgtagagggcaccata
tttgctctgaaggactttggcatgcaagtaaaagtgggtggtcacatcaagggggtagta
cctcgcttgcatctagctgatgtggttctaaaacaaccagaaaagaaatacagtgtgggg
aacactgttaaatcccgggtgctttcttgcaatcctgacacaaaggtgcttattctgaca
cttaagaaaattctcgtcacttcaaaactccctattcttgctagctatgaagatgcaaag
ccaggtctagttacccatggatttgttgtgtgtgctagggagtttggctgtattgtgaag
ttctacaatgacgtaaaaggcctggtccccaagaatgagctcggtttggcacccattacc
attcctcaggaagctttctatgaaggccaggtggtcaaagtgattgtcttaaaatgtgag
cccgagcaggagagactactgctctcattcaagttaactgataatgctcttgctgaggat
tctacaggggaagaggtttcaaaaaagggagaagtgacatatgaaactggacaggttgct
gatgtgaaaattctaaagaagaaagaaaatggcctagaagttaaaatcttgccagatgag
gtttctgcctatcttcccacaatgcacctctctgaccatgtgaccaattgtagactctgg
tggcattggctcaaaggcaatgaaatcctacacaatgttgtatgccttcatgacaaggaa
ggtcatattaccctgagcaggaagccagctatcatttctgctattgagggaggaaatgtg
gtgaagaacttctctgacatccagcctggattgctgctgacgggctatgtgagaaacatt
atgccatatggtgtgtttgtggagttcccgtatggtttgacggggctggcacccaaatca
gcaatgagtgataaatttgtgacgaataccaaagatcactttgtgattggtcagactgtg
attgccaaggtgaccagcattgatgaagaaaagaagcgtttccttctgtctctgaaggta
tctgactgctcctctgaagattctgtttctgagagcttctccttgctgtttcagtacttc
aaggagctgcaggagatcaagagcattatgagcaaaagagacagttccagtgtagcccag
aaagtctgtgaattaaaccctggacagaggctgcagttggtggttcaagaagtcaaggca
gacggttcagtgctgttcagtggcacaggtgcttctgggttgactgtagagtccactcac
agacatcttggaggcaaaaaagttgttatgggtgaccaagcaacagcggtgattctccac
atcgattccctgaaatcaaaggtttatgtttctcttcaagaagagcttctttccccaaaa
caaaagacgttgacagctgactctcagcatccagctgtggtgcagcacgtggcttcagag
tatgcagttgcttccttagtggaaacaggtcaattgattgccatccctttggcctcccac
ttcaatgatacattccggtttgattctgaaaaaatgaaggtggggcagtcagtcatagtg
gttctgaagaccacagaggcaggtgatcgtgggcttttgcttgctttgctaagttcaaaa
aagagaaggaacatgaccaggcggcgacaggagtccgagacactagaggagacatcagcc
gtggtaaaacattctctgtccttgggagatatggtcacaggaactgtgaagtctgtcagg
cccacctttgttcttgtgacactatatgataagctaataggcaacattcatgcgtcccag
attttggatgatgttcccattggcagctttcccacatcaaagttaaaggttggacagaag
gtgactgctcgggtcatcgggggtcgagatgttaaaactcacaggtatctgcccatctcc
catccatacttcacccagaccatcccagagctcagtatccgaccaagggaactgaaagga
gaaagcaacacagccctgtgtcctgaagaatgcaacacagaagaagtgttaaagcctttc
aagcctgggcagatggtgacatgctttgttaagaagtacgacaccataaagaaatggctg
gaggtggaaattactgctaatgtcagagggagagttcagccactgctcctttcccctaac
accaaggtcttaaaacacgcagaaaaatacttcaagaaaggacaaactttggctgcaaca
gtggtaggctctgacatcactgaaaccaaactctctctgtcactgacaggagttcattct
ctggagaaaggaaccatcgttctaggctatgtcaagaaggtgattccacatgttggcctg
actatcacgcttccctttggaaagactggcaaagccagccttttccacttgagtgattca
ttcgttgagcagccactagaaggtttcagcacgggacaacttgtcaaatgctgtgtcctt
tctaatgatgataatataatggaagtgtccctccggcagtccagggttaatcccaagagc
catggtaaagtagaagacactgaaatcatgagcctcgataatgttcaggaaggtcagctc
atcagaggctacgtcacctctgtgacaccatctggtatcttctttggactgtctgattct
gttgtgggtcggatcccattggaatacatcacccatctctttgtgccggatcagcgtata
tgtgcaaaatttatacacatcggacagttactcactgccaaagttctccgtataaacaaa
gaagagaatcatgtggagctctcagttcttcctaaagacactgggagaccaagtattatc
ccagagtccctgggtttgccacacagtgaaatggacacaaatgttaagaagttgaagaag
cgcaaaagttctgaaagtgaacagaaagtaaagcgaggaaaaaagagagttcgttgcact
gaagaggacgatagtggtattgaggtctattgtcgggaggaagaggaggaagaaaagtat
gagaagagctctaagggaagagaggttcccaggctgaaggtttccaccagctttacgtgg
gaggaagatttaaatgtactggatacaaccatgttgagagacagagagcagagttcttcc
agtgaggaagatgaagaagatacacagttgacgacaaagaaactaacaaggcagaacaag
gagctggagaagcaaagggcagaaaaggaactctccaaactggaagctgccctgatggac
cctactcggcagccccagtctgcagatgactttgaccgcttggtccttggcaacccagac
agctccatcctctggttgcagtatatggccttccatctccaggcgacagagatagagaag
gccagagctgtggccgagagggccctcaaaacaatttccttcagggaagagcaagagaag
gtgaatgggtgggtagccctgctgaccctggagaacatgtacggtacagaggaagccctg
atgaaagtctttgaaagagccattcagtacaatgagcccctgaaagtttttcaacagctg
gcagacatctatgctgattctgagaaatataagcaagctgatgatctgtacaatacaatg
ctgaagcgctttcgccaggataagtctgtgtgggtgaaatataccacttttcttctgaaa
agaggcctggtagaggcagctcacaggctcctcccacgtgcactcaagtgtctgccagac
aaagaacatgtggatgtgatttcaaagctggcacagcttgaattccggtttggagatcca
gaacatggcaaggccatttttgagaacaccctgagtacatacccaaaacgcacagacatc
tggtcagtttatatagacatgatgataaaacatggcagccagaaggaagtacgggaagtt
tttgaacgagtaatacacctcagcctagcaccaaagaagatgaagtttttctttaaacgc
tacctagagtatgagaagaaatacggcacagcagaaacagtccaggctgtgaaggcagca
gcactggaatatgtggaatccaagaacagtcttgctgagagttga
DBGET
integrated database retrieval system
