Gekko japonicus (Schlegel's Japanese gecko): 107120575
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Entry
107120575 CDS
T04299
Symbol
THOC1
Name
(RefSeq) THO complex 1
KO
K12878
THO complex subunit 1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03013
Nucleocytoplasmic transport
gja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107120575 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
107120575 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107120575 (THOC1)
03041 Spliceosome [BR:
gja03041
]
107120575 (THOC1)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107120575 (THOC1)
Spliceosome [BR:
gja03041
]
Complex C
Other components
EJC/TREX
107120575 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107120575 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
CTD7
Motif
Other DBs
NCBI-GeneID:
107120575
NCBI-ProteinID:
XP_015278786
LinkDB
All DBs
Position
Un
AA seq
657 aa
AA seq
DB search
MLPPLFSLPEARLRFTNSTRDALNNKTIKPLLSAFSQVPGSENEKKFTLDQAFRVVLEEE
IINKASCENVLAIISLAINGVTEGICTASTPFVLLGDVLDCLPLDQCDRIFTFVEKNVTT
WKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFN
LENITVFNTNEQESMLGQKHVEERDEGMEVEEGEMGDDEAPTSCSIPIDYNLYRKFWSLQ
DYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAKFL
TSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKLVYQ
LLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERPGDSKPIRPFVRKRPAPED
FLGKGPNKKILMGNEELTRLWNLCPDNMEACKSENREYMPTLEEFFEEAIEQAVPENMVE
NEFKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIK
TGEDEDEEDNDALLKENNESPDVQRDKLVTGEQIESFANRLGEYWKLLAPYLEMKDSDIR
QIESDSEDVKMRAKQLLLAWQDQEGIRATLENLITALNKAGLHDLAESLTNDTENYS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgccactcttcagcttgcctgaggcgcggctacgttttacgaactctactcga
gatgctctcaacaacaaaactattaaacctttattgagtgccttcagccaggtacctgga
agtgaaaatgaaaaaaagtttaccctggatcaagctttcagagttgtgttagaagaagaa
attataaacaaagcttcctgcgaaaatgtcctggcaatcatttctcttgctattaatggg
gttacagaaggtatttgcactgcatcaaccccttttgtgctgttgggagatgttttggat
tgccttccattggatcaatgtgacagaattttcacatttgtggaaaaaaatgttacgaca
tggaaatcaaatacattttactcggcaggaaaaaattacttgctcagaatgtgcaatgac
ctcttacgaaggttatctaaatcacaaaatacagtgttctgtggaagaattcagctattc
ctggctagattattccccctttcagaaaagtcagggctcaacttgcaaagtcagtttaac
ctggaaaatatcaccgtttttaataccaatgagcaagagagcatgctaggacagaagcat
gtggaagaacgggatgaaggaatggaagtagaagaaggtgaaatgggagatgatgaagct
cctacgagttgctctatccctatagattacaacctgtacagaaagttctggtcacttcaa
gactactttagaaatcctgtacaatgctatgaaaaggtctcatggaaaacatttctaaag
tactctgaagaagtattagctgtctttaagagctacaagttggatgacactcaggcttca
aggaagaaattggaggaactgaaaactggaggagagcacgtttactttgcaaagtttctc
acgagtgagaagttaatggatttacaactgagtgacagcaacttccgccgtcacatctta
ctgcaatatttaatactatttcagtatttaaagggacaggtgaaatttaaaagctcaaac
tatgttctaactgatgagcagtccctctggattgaagatactacaaagttagtctaccag
cttctttcagaaaatcccccagatggagagagattctcaaaaatggtagagcacatatta
aacacagaagaaaattggaattcatggaaaaatgaaggttgcccgagttttgttaaggaa
agaccaggtgattccaaaccaataagaccttttgtgcgaaagagaccagctcctgaagac
tttctggggaaaggacctaacaaaaaaattctcatgggaaatgaagagttaacacggctc
tggaatttatgccctgataacatggaagcttgtaaatctgagaatcgggaatatatgcca
acattggaagagttctttgaagaagctattgaacaggcagttcctgaaaacatggttgag
aatgaatttaaggcagtgaataattctaactatggctggagggcattaaggctgttggca
cgcagaagtcctcacttttttcagccaaccaaccagcaatttaagagtttgccagaatac
cttgaaaacatggtcatcaaattagctaaagaactacctcctccttctgaagaaattaaa
acaggcgaggatgaagatgaggaagataacgatgctttattaaaggaaaacaacgaaagt
ccagatgttcaacgggacaaacttgtaacaggggagcaaatagagtcatttgctaacagg
cttggcgaatattggaaacttctagctccatacttggagatgaaagactctgacataagg
caaattgaatcagatagtgaagatgtgaagatgagagcaaagcagctccttcttgcctgg
caagaccaagaggggatccgtgcaaccttggaaaacctcatcactgcattgaacaaagct
gggttacatgatctggcagaaagcttgacaaatgacactgaaaactacagttaa
DBGET
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