Gekko japonicus (Schlegel's Japanese gecko): 107122217
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Entry
107122217 CDS
T04299
Symbol
SAMHD1
Name
(RefSeq) SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03250
Viral life cycle - HIV-1
gja04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107122217 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
107122217 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gja03400
]
107122217 (SAMHD1)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107122217 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
PDEase_I
Motif
Other DBs
NCBI-GeneID:
107122217
NCBI-ProteinID:
XP_015280729
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All DBs
Position
Un
AA seq
604 aa
AA seq
DB search
MQNSGKEGISKRARPDSPAEGFHTPEKKVSAWEDADPDHLHPRHWGTEQLCCFLRRNSFG
DPVQRCFRENQVTGSVLPHVTSSYLEQIGIGCPTVRTKLLPCLRKLEQTHTDIMKVFNDP
IHGHIEMHPLLVRIIDTPQFQRLRYIKQLGGTYYVFPGGSHNRFEHSLGVGHLAGRLVRA
LQERQPGLDINQRDILCVQIAGLCHDLGHGPFSHMFDGRFIPLANPKSKWKHEQASVKMF
EYLIVSNELGPVMEYYGLLLPEDIDFIKEQIGGPTKTNDSSWPYRGRPKEKSFLYEIVAN
KRNGIDVDKWDYFARDCHHLGIQNNFDYERFIKFARVCEVDNEKHICTRDKEVGNLYDMF
HTRNCLHRRAYQHKVGNIIETMITDAFLKADKYIKIKGSKGKEYHLSTAIEDMKAYTKLT
DDIFLTILHSELPELREAKEIEQYDELPAEIAASKPEINSQDVGLKPETKNQDVGLMAED
FIVDVINMDYGMKEKNPINNVRFYCKSDITKAVKITKEQVSKFLPETFAEQLIRVYCKRM
DKESIDVARKYFVQWCIVKDFSKPQDGDVVAPELTPMKEGWSQDEGDKRPALEDTQQSIR
KALF
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcagaactctggcaaggagggaatctccaaacgggcacggcccgacagcccggccgaa
gggtttcacacccccgaaaaaaaggtctctgcgtgggaagatgcggatcccgaccacctc
cacccccggcactgggggaccgagcaactctgctgcttcctccgccgcaacagctttgga
gacccggtgcagcgctgcttccgagaaaatcaagtgactggttcagtactgccacatgtc
actagctcttatcttgaacaaataggaattggatgtccgacagtgagaacaaaacttcta
ccctgtttgcgcaagctggaacaaactcatactgacataatgaaggtatttaatgatcca
attcatggccatattgaaatgcatcctctgcttgttcgaatcattgataccccccagttc
cagcgtctacgatacattaaacaattaggtggtacttactatgttttcccaggaggatca
cacaaccgctttgaacattcccttggggttggccatctcgcaggccgcttggtccgagca
ctgcaggaacgacaaccaggactggatatcaatcagagggatattttatgtgtccaaatt
gctggtctttgtcatgatctgggtcatgggccgttctcacatatgtttgatggaagattc
attccacttgcaaatccaaaatccaaatggaagcatgaacaggcttctgtgaagatgttt
gagtacttgattgtttccaatgagctgggaccagtcatggagtattatggtctcctactg
cctgaagatatagattttatcaaagaacaaataggaggacccacaaaaactaatgactct
tcatggccttacagaggacgacctaaagagaagagctttctttatgagattgtggctaac
aaaagaaatggcattgatgtagataaatgggattactttgccagggattgtcatcatctt
ggaatccagaataactttgattatgaacgcttcattaaatttgctcgggtctgtgaagta
gataatgagaagcatatttgtacccgggataaggaggttggaaatttatatgacatgttc
catacccgaaactgcctgcaccgcagagcctatcagcacaaggttggcaacatcattgaa
actatgattacagatgctttcttaaaagctgataagtatatcaagataaagggctctaaa
ggaaaagaataccacctctctacagctatagaggatatgaaagcttacactaagctaaca
gatgacatctttctgacaattctgcactctgaactcccagagctgcgagaagcaaaggaa
attgaacagtatgatgaattgccggctgaaattgctgcatctaagccagagataaacagt
caggatgttggattgaaaccagagaccaaaaatcaggatgttggattgatggctgaagac
ttcatagttgatgttatcaacatggattatggaatgaaagagaagaatcctatcaataat
gttcgtttctattgcaagtctgatatcactaaggcagtcaaaattactaaagaacaggtc
tcaaagtttctgccagagacatttgctgaacagttgattagggtttactgtaagagaatg
gataaagagagtattgatgttgctagaaaatatttcgttcaatggtgcatagtcaaggat
ttcagtaaaccacaggatggtgatgtggttgcccctgaacttactccgatgaaagaaggc
tggagtcaggatgaaggtgataaaaggccagcactcgaagacacgcagcagagtatcaga
aaagctcttttctga
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