Geobacillus genomosp. 3: M493_00835
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Entry
M493_00835 CDS
T02798
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
gjf
Geobacillus genomosp. 3
Pathway
gjf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gjf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M493_00835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gjf03021
]
M493_00835
03400 DNA repair and recombination proteins [BR:
gjf03400
]
M493_00835
Enzymes [BR:
gjf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M493_00835
Transcription machinery [BR:
gjf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M493_00835
DNA repair and recombination proteins [BR:
gjf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M493_00835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AGT30558
UniProt:
S5ZJS3
LinkDB
All DBs
Position
115260..118832
Genome browser
AA seq
1190 aa
AA seq
DB search
MTGRLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFKEISPIEDFSG
NLSLEFIDYSLGEPKYSVEEAKERDVTYAAPLRVKVRLINKETGEVKEQDVFMGDFPLMT
ETGTFIINGAERVIVSQLVRSPSVYYSDKIDKNGKRGYSATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFSSDQEIVDLLGDNEYLRNTLEKDNTDSTEKALIEIYERL
RPGEPPTLENAKSLLASRFFDPKRYDLASVGRYKINKKLHIKNRLFNQRLAETIVDPETG
EVIAEAGAIIDRRMLNRLLPYLEKGVGLQMHRPAEGVADGPIEVQTVKIYAPNDPDNEKV
INIIGNGFIAEDVKHITPADIIASISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIAAIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSTYAKVNKF
GFIETPYRRVDPETGKVTDQIDYLTADEEDNYVVAQANVPLAEDGTFLEENVIARFRGEN
IVVKRDRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLLEPEAPIVGT
GMEYVSAKDSGAAVICKHRGIVERVEAKEIWVRRLIEVDGKEVKGDLDKYRLLKFIRSNQ
GTCYNQRPIVKKGDIVEKGEILADGPSMDKGELALGRNVLVAFMTWDGYNYEDAIIMSER
LVKEDVYTSVHIEEYEAESRDTKLGPEEITRDIPNVGEDALKNLDERGIVRIGAEVKDGD
LLVGKVTPKGMTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPFLPDGTPVDIMLNPL
GVPSRMNIGQVFELHLGMAARKLGLHIASPVFDGATEEDVWNILEEAGMARDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENIPEPGVPESFKVLIKELQSLGM
DVTILTGDEQEINMENFDDDDDHAPDAIMVDVKPIEPEEVDEEKDAVTKE
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggccgactagttcaatacgggcgacaccgccaacgaagaagttatgcacgcatt
agcgaagtgctggaattgccgaacttgattgaaatccaaacgtcttcgtaccaatggttt
ctcgatgaaggactgcgggaaatgttcaaggaaatttctccgatcgaggacttttccggc
aatctctctcttgaatttatcgactatagcttaggagagccaaaatattcggttgaagag
gcaaaagaacgcgacgttacatatgcggcgccgcttcgcgtgaaagttcgcctcatcaat
aaagagacgggcgaagtgaaagaacaagacgtgttcatgggtgattttccactgatgacg
gaaacgggcacgtttatcatcaacggggcggagcgtgtgatcgtctcccagctcgtccgc
tcgccaagcgtctattacagtgataaaatcgataaaaacgggaaacgcggctattcggca
acagtgattccgaaccgcggcgcatggctcgaatatgaaaccgatgcgaaagacgtcgtt
tacgttcgtatcgaccgcacccgtaaattgcctgttacggtgcttcttcgtgcgcttggg
ttcagctccgaccaagaaatcgtcgacttgcttggtgataacgaatatttgcgaaatacg
cttgaaaaagataataccgacagcacggaaaaagcgttgatcgaaatttatgagcgtctc
cgcccgggtgagccgccaaccctagagaacgcaaaaagtttgcttgcgtcccgctttttt
gacccgaaacgatacgatctggccagtgtaggacgctataaaatcaacaaaaaacttcat
attaaaaaccgcttgtttaaccagcggctggcagaaacgatcgtcgatccggaaacggga
gaagtcatcgctgaggctggggccatcatcgaccgccggatgctgaaccgcctgttgccg
tatttggaaaaaggagtcggactgcagatgcaccgcccggctgaaggagtggcggacggt
ccgattgaggtgcagacggtgaaaatttacgcgccgaatgacccagacaatgaaaaggtg
atcaacatcatcggcaacggttttatcgccgaagatgtcaaacatattacgccggcggac
atcattgcctcgatcagttatttcttcaacttgcttcacggtgtcggcgatacggacgac
atcgaccatttaggcaaccgccgtctccgttcagtcggcgaactgttgcaaaaccaattc
cgcatcggcttgtcgcggatggagcgcgtcgtgcgtgagcgcatgtcgatccaagatacg
aacacgattacaccgcagcagctcatcaacattcgcccggtgatcgcggcgattaaggaa
ttttttggcagctcgcagctgtcgcagtttatggatcagacgaacccgttggctgagttg
acgcataaacgccgcctttctgcgcttggccctggcggattgacgcgcgagcgcgccgga
tttgaagtgcgcgatgtccactattcgcattatgggcggatgtgtccgatcgagacgccg
gaaggcccgaacatcgggttgatcaactcattgtccacgtatgcgaaggtgaacaaattc
ggttttattgaaacgccgtaccggcgcgttgatccggagacgggaaaagtaacggaccaa
atcgactatttgacggccgatgaagaagacaattacgttgtggcgcaagcgaacgtgccg
cttgcggaagacgggacgttccttgaagaaaatgtcatcgcccgtttccgcggtgaaaac
atcgttgtgaagcgcgaccgcgtcgactacatggacgtgtcgccgaagcaagttgtttcc
gcggcgacggcatgcatcccgtttttggagaatgacgactccaaccgcgctttgatgggc
gcgaacatgcagcgtcaagcagtgccgctgttagaaccggaagcgccgatcgtcggtaca
ggaatggagtatgtttcagcgaaagattcgggtgcggcggttatttgcaagcaccgcggc
attgtcgaacgtgttgaggcaaaggaaatttgggtacggcgactcattgaggtcgacggc
aaagaagtcaagggtgatctagataaatatcggttgctgaagtttattcgttccaaccaa
ggcacttgctacaaccaacggccgatcgtgaaaaaaggcgatatcgtcgaaaagggtgaa
attttggctgacggcccgtcgatggataaaggtgaactggcgcttggtcgcaatgtgctc
gttgcctttatgacgtgggacggctacaactacgaagatgccatcatcatgagtgagcgc
cttgttaaagaagacgtgtacacatcggtccacattgaggaatacgaggcggaatcgcgc
gacacgaaactcggtccggaagaaattacgcgcgacatcccgaacgtcggtgaagatgcg
ttgaaaaacttggatgagcgcggcatcgtccgcatcggcgccgaagtaaaggacggcgac
ttgctcgtcggcaaagtgacgccaaaagggatgaccgaattgacggccgaggagcggttg
ctccatgccatctttggtgaaaaagcgcgtgaggtgcgcgatacgtcgctgcgcgtcccg
cacggcggcggcggtattgttcttgacgtgaaagtatttaaccgcgaagatggcgacgaa
ctcccgccaggcgtcaaccaacttgtccgcgtctacatcgtgcagaagcggaaaatttcc
gaaggtgacaaaatggcgggtcgccacgggaacaaaggggttatttcccgtattcttcca
gaagaagatatgccgttcttgcccgatggcacgccggttgacatcatgttaaacccgctc
ggcgttccatcgcggatgaacatcgggcaagtgtttgagctgcatcttggcatggcggcg
agaaaacttggcttgcatatcgcttctccggtctttgacggagcgacggaggaagatgtt
tggaacattcttgaagaagccggcatggcgcgtgatgccaaaaccgtgctatatgacggg
cggacgggtgaaccatttgacaaccgcgtgtcggtcggtattatgtatatgattaagctc
gcccacatggttgatgacaagcttcatgcccgttcaacaggtccgtactcactcgtcacc
cagcagccgctcggcggcaaggcacagtttggcggccagcgtttcggcgagatggaggta
tgggcgcttgaagcgtacggtgcggcatacacattgcaagaaattttgactgttaaatcc
gacgacgttgtcggccgcgtcaaaacatacgaagcgatcgtcaaaggggaaaacattccg
gagccgggcgtgccggagtcgtttaaagtgttgattaaggagctgcaaagtttagggatg
gacgtcacgattttgacaggtgatgagcaagaaatcaacatggaaaactttgacgacgac
gatgaccatgcgccggatgcgattatggtcgacgttaagccgatcgagccggaagaggtt
gacgaagaaaaagacgcggtgacgaaagagtaa
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integrated database retrieval system