Gordonia jinghuaiqii: H1R19_06505
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Entry
H1R19_06505 CDS
T07538
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gji
Gordonia jinghuaiqii
Pathway
gji03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H1R19_06505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gji03400
]
H1R19_06505
Enzymes [BR:
gji01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
H1R19_06505
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H1R19_06505
DNA repair and recombination proteins [BR:
gji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H1R19_06505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
zf-TFIIB
Ribosomal_S13
Arg_repressor_C
Motif
Other DBs
NCBI-ProteinID:
QMT02781
UniProt:
A0A7D7LVR5
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All DBs
Position
1469305..1470195
Genome browser
AA seq
296 aa
AA seq
DB search
MPELPEVAAIADYVDGRAAGLPIRRVDVASLSVLKTADPPYSALTDRIVESVGRVGKYLV
IRTIPGSAATASEPMLHLVIHLSRAGWVRWSEELSPKPLRPGGKSPIALRVHCGLPGEGF
DVTEAGTQKRLAVWLVRDLADVERIAGLGPDALDLTPEQFAQILAGTTGRIKNVLTDQHT
IAGIGNAYSDEILHTARLSPFASSKTLKADQVETLYDAVRAVLTDATGRLEGQAVARLKS
EKRTGLRVHARTGLPCPVCGDTVREVSFADRSFQYCATCQTGGKVLADRRMSRLLK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttccagaggtggccgccatcgccgactacgtcgacggccgggcggccgga
ctcccgatccgcagggtcgacgtcgcgtcgttgtcggtgctcaagaccgccgacccgccc
tacagtgcgctgaccgaccggatcgtggaatccgttgggcgcgtcggcaaatatctggtc
atccgcaccattccggggtcggcggcaaccgcgtcggagccgatgttgcacctcgtcatc
cacctgtcgcgggccggctgggtccgatggagcgaagagctctcacccaagccgctgcgc
cccggcggcaagagcccgatcgccctgcgggtgcactgcggacttcccggcgagggattc
gacgtcaccgaggcaggtacccagaaacgtctcgcggtgtggctggtgcgtgacctcgcc
gacgtcgagcgcatcgccgggctcggacccgacgccctcgacctgacgccggagcagttc
gcgcagatcctcgccggcacgaccggccggatcaagaatgtgctgaccgaccagcacacc
atcgccgggatcggcaacgcctactccgacgagatcctgcacaccgcccggctctcgccg
ttcgcgtcgtcgaaaaccctgaaggccgaccaggtcgagacgctctacgacgccgtgcgc
gcggtactcaccgatgcgaccgggcgcctcgaaggtcaggcggtcgcccgactcaaatcg
gagaaacgcaccggactccgcgtccacgcccgcaccggcctgccgtgcccggtgtgcggg
gacaccgtccgcgaggtgtccttcgccgatcggtcgttccagtactgcgccacctgccag
accggcggcaaggtgctcgccgatcgtcgcatgtcgcgcctgctgaaatga
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