Geobacillus kaustophilus: GK2243
Help
Entry
GK2243 CDS
T00217
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gka
Geobacillus kaustophilus
Pathway
gka03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GK2243 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gka03019
]
GK2243 (recQ)
03400 DNA repair and recombination proteins [BR:
gka03400
]
GK2243 (recQ)
Enzymes [BR:
gka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GK2243 (recQ)
Messenger RNA biogenesis [BR:
gka03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GK2243 (recQ)
DNA repair and recombination proteins [BR:
gka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GK2243 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
BAD76528
UniProt:
Q5KXQ8
LinkDB
All DBs
Position
complement(2278880..2280403)
Genome browser
AA seq
507 aa
AA seq
DB search
MDELTKTLRMKFGHASFRPGQREVAEDVLAGRDVLAMLPTGSGKSLCYQLPAYLLQGSVL
IVSPLVSLMEDQVEQLRRRGEKRVIAFHSLLDAEEKWQALASLAEFRFIYASPEMLQSAK
FLTALRRVCISLFVVDEAHCISQWGYDFRPDFLKLGEIRRALGAPPCLALTATAPPEVQE
DIIRTLGMDGARRHIHSVDRPNIALCVEHCSSTEDKAARLADYAKRLEGPGIIYFSSRQW
AEEMARRLEQCGAGRVAYYHAGMDGEQRLLVQQQFVYGQLDIVCCTSAFGMGVNKENVRF
VLHFHMPAQLEAYVQEIGRAGRDGAPSLAVLFYADGDRAMAQAVAEAELLSPRELREWCW
RLPEGAGWEAAMATLEAAGFTDVQKRLSAYFLEREQRAMPGWLTAEAKERLYGRMAAAIE
ARRRWKRKKLQEMDEWVHLSSCRRQALVCAFGEELTDQQNVCCDRCGLSLDGYERAVRRP
EEAPVRHWREELWDMLFGGGRTNETAK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
ttggacgagttgacgaaaacgctgcgcatgaagttcggacatgcttcattccgcccgggt
cagcgggaagtggcggaagatgtgcttgctgggcgcgacgtgctggcgatgctgccgacc
ggaagcggcaagtcgctttgctatcagctgccagcgtatttgcttcaaggcagtgtgctg
atcgtttcgccgcttgtgtcgctcatggaggaccaagtcgagcagttgcgccggcgcggg
gaaaagcgagtgattgcttttcacagcctgcttgatgccgaagaaaaatggcaggcgctc
gcttcgcttgcggagtttcgctttatttacgcgtcgccggagatgctgcagtcggcaaaa
tttttaacggcgcttcggcgcgtatgcatttcgctttttgtcgtcgatgaagcgcactgc
atttctcaatggggatatgactttcgcccggactttttaaagcttggggagatccggcgc
gcgctcggggccccgccgtgtttggcgttgacggcgacggcgccgcccgaggtgcaggag
gatattattcgcacgctcgggatggatggcgcccgccgccatattcattccgtcgatcgc
ccgaacatcgccttgtgcgtggagcattgttcatcaacggaggacaaagcggcgcgcttg
gccgattatgccaagcgtctcgaaggcccgggaatcatttatttttcgagccgtcaatgg
gcggaagagatggcgcgccggctcgaacagtgcggcgcggggcgggtcgcctattaccat
gccggcatggacggggagcaacggctgctcgtgcagcagcaatttgtctacggtcagctt
gacatcgtatgttgtacaagcgcattcggcatgggcgtgaacaaagaaaacgtccgattt
gtgcttcattttcatatgccggcccagctcgaggcgtacgtgcaggaaatcgggcgcgcg
gggcgcgacggagcgccaagccttgctgtgttattttatgcggacggcgaccgggccatg
gcccaggcggtggcggaggccgagctgttaagtccgcgcgagctgcgtgagtggtgttgg
cggctgccggaaggagccggatgggaagcggcgatggcgacgctcgaggctgccggattc
accgacgtacaaaagcggctgtcggcgtattttttagaacgggaacaacgggcgatgcct
ggttggctgacagcggaggcgaaagagcggctgtacggcaggatggcagccgccatcgag
gcgcggcggcgctggaagcggaaaaaactgcaggaaatggatgaatgggtgcacttgtct
tcgtgccggcgtcaagcgcttgtctgcgcgtttggcgaggagctgacggatcagcagaat
gtctgctgcgatcgctgcgggctttcgcttgacggctatgaacgagccgtccgccgtccg
gaggaggcgccggttcgccattggcgcgaggagttgtgggacatgctttttggcgggggg
cggacgaatgaaacggcaaagtga
DBGET
integrated database retrieval system
