Grimontia kaedaensis: K6Q96_04520
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Entry
K6Q96_04520 CDS
T09175
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K00067
dTDP-4-dehydrorhamnose reductase [EC:
1.1.1.133
]
Organism
gkd
Grimontia kaedaensis
Pathway
gkd00521
Streptomycin biosynthesis
gkd00523
Polyketide sugar unit biosynthesis
gkd00541
O-Antigen nucleotide sugar biosynthesis
gkd01100
Metabolic pathways
gkd01110
Biosynthesis of secondary metabolites
gkd01250
Biosynthesis of nucleotide sugars
Module
gkd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
K6Q96_04520 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
K6Q96_04520 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
K6Q96_04520 (rfbD)
Enzymes [BR:
gkd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
K6Q96_04520 (rfbD)
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Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
DapB_N
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
USH03286
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Position
I:932207..933091
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AA seq
294 aa
AA seq
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MIKILVTGSLGQVGRCLVDQLSTVDGVDFIALDREELDITDSSAVADIVHSFQPDVIINA
AAHTAVDRAEDEVELSYAINRDGPESLAKAAEKTGAAILHISTDYVFAGDKDGEYIESDE
TGPQGVYGKSKLAGEIAVANACKRHVILRTAWVFSEHGGNFVKSMLRLAQTRDSLGIVAD
QFGGPTHAGDIARALIEISFSITQKNHNGFGVYHYSGLPHVSWYQFAKYIFDEANEQALL
NKNMSVNPISTSDYPTLAKRPANSKLNNNKIQSEFGIEPSDWQLALKNLKQYTS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaaatattggtaacgggcagcttgggtcaggtagggcgttgtttagttgatcaa
ctgagtaccgtagacggagtagacttcatcgcactggatcgggaagagcttgacatcacg
gactcaagtgccgtggctgatattgtacattcttttcaaccagatgtgattataaatgcc
gctgcgcatactgcagtcgaccgcgccgaagatgaagttgagctatcatatgctataaat
cgagatgggcctgagagcttggcaaaagccgctgaaaaaacaggcgccgctatccttcat
atctcgacggactatgtatttgccggggacaaagatggcgaatacatagaaagtgacgaa
actggtccgcaaggtgtttacggaaaaagcaaactggcaggtgaaatcgctgtggctaat
gcctgtaagcgccacgttattctaagaacggcctgggtattcagcgaacatggtggcaac
tttgtcaaatccatgcttcgtttagcccaaacccgtgactctttaggtattgttgcagac
caatttggtggcccgacccatgcgggggatattgcaagagcgttaattgaaatttcgttt
tcgattactcaaaaaaatcataatgggtttggtgtttaccactactcaggattaccgcat
gtttcatggtatcaatttgctaaatacatctttgatgaagcgaatgaacaggctttactg
aataaaaatatgtcagtaaaccctatttcaacatctgattacccaacactagctaaacgc
ccagcaaactccaaactaaacaacaataaaatccaaagtgaatttggaattgaacctagt
gattggcagttagcactcaagaacttaaaacagtatacgagttaa
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