Grimontia kaedaensis: K6Q96_06490
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Entry
K6Q96_06490 CDS
T09175
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
gkd
Grimontia kaedaensis
Pathway
gkd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K6Q96_06490 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gkd03400
]
K6Q96_06490 (uvrB)
DNA repair and recombination proteins [BR:
gkd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K6Q96_06490 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K6Q96_06490 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
UvrB
ResIII
UvrB_inter
DEAD
Helicase_C_2
UB2H
AAA_30
AAA_22
Kinesin
SLFN-g3_helicase
DUF87
P-loop_SecA
Microtub_bd
AAA_5
Motif
Other DBs
NCBI-ProteinID:
USH03638
LinkDB
All DBs
Position
I:complement(1396730..1398712)
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AA seq
660 aa
AA seq
DB search
MGQEIFLLHSKNAPAGDQPEAIAKLIAGIEEGKTHQTLQGVTGSGKTFTMANIIHRLQRP
TLILAHNKTLAAQLYHEMLAFFPKNAVEYFVSYYDYYQPEVYIPGSNRFIRKDSAINAQL
ERLRLSTTKALIERKDVIVVASVSSVYGLGSPDDYRALQIPLQPGERLNLTTLENQLAKL
HYEPGGEPLSRGSYRISPHKVDIFPADSEKDAIVVMLDNTQTITQLLRVDNATGEILGDL
EHYHVSPKTLYSTSPEQIARACKAIEAELEQRTAELSRNHQVAEAARLYERTTRDLEMLR
LQGYCGGIENYASYLTGRDPSLPPTTLMDYLPKGGLLFIDESHVMVPQIHAMYKGDQSRK
DTLIDYGFRLPSAKFNRPLAFEEFEKIKPQTIFVSATPGDYEVKRSGGVVIDQVIRPTGL
LDPEIEIVPLAQTQEDLLRRIRICIERKERVLVTTLSKQSAEALYQRYTEEGISCQYIHS
DVKTEDRVEIIRQLRRGELDVLIGINLLREGLDIPEASLVAILEADHAGFLRSTEALIQI
IGRAARNANGKAVLYADKITPAMKSAMDESNRRRVKQIAYNKAHQLQPKSSNRTIDPTIN
VHIENKDPSMCATLEELCHRITHTERELFRLCSEKDAQKRADTDALRQELDALYRQYIFM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaggaaatctttttgctccactcaaagaacgcaccggccggtgatcagccggaa
gccattgccaaactcatcgccggcattgaggaagggaaaacccaccaaacactccaaggt
gttacagggtctggcaagacattcaccatggcaaacattattcaccgtttgcagcgccct
acccttatccttgcccacaacaagacactggctgcgcagctctaccatgagatgttggcc
ttctttcccaaaaacgcggtggagtatttcgtctcctattacgattactatcagccggaa
gtctatattccgggcagtaacaggtttatcagaaaagactccgccatcaacgcacaactt
gagcggcttcggctttccactaccaaagcgctgattgagcgaaaagacgtgattgtggta
gcgtcggtttcttccgtttatggtttaggttcaccagatgactaccgcgcgctccagatt
ccgcttcaacccggagaacggttgaacctcactacactggagaaccagttagccaaactt
cactacgaacccggcggtgagcctctttctcgtgggagttaccgcatcagtccgcataaa
gtggatatcttcccggcggattctgaaaaagacgcgatagtggtgatgctggacaatacc
caaaccatcactcaactgctgagagtggacaacgccacgggcgaaattctgggtgacctg
gaacattatcatgtctcgccaaagaccctctattccacctcgccggaacaaattgcccgc
gcctgtaaagcgatagaagctgagcttgaacaacgcactgccgaactcagtcgcaaccat
caagtcgcagaagcagcaagactttatgagcgcaccacacgggatttggagatgctgcgg
ttacaaggttactgcggaggcattgaaaactatgcgtcgtatctgactggtcgtgacccc
agccttcctcccaccaccctgatggactatctccccaagggaggcctgctgtttattgat
gaatcccatgttatggtgccgcagatccacgccatgtataaaggcgatcaaagccgaaaa
gacacactgattgattatggcttccgcctgccttctgccaaattcaaccgccctctcgcc
tttgaagagtttgagaagataaagccgcagaccatttttgtgtcagcaacacccggcgac
tatgaagtaaaacgctccggtggtgtggtcatcgatcaggtgatacggccaaccggattg
ctagaccctgaaatcgagatagtgccattggcacagactcaggaagacctgctgcgccgc
attcgaatctgtattgaacgcaaagagcgggtgttagtgactaccctcagtaagcagagt
gcagaagccctttatcagcgatacacagaagaaggcattagctgccagtacattcacagc
gacgtcaaaaccgaagatcgcgttgagatcattcgacaactccgacgcggcgaattggat
gtgctgattggtattaacttactgagagagggactggatattccggaagcgtctttggtt
gcaatacttgaagcggatcatgcaggctttctgcgttccacagaggcgctcatccaaatc
attggccgcgcggcccgtaatgccaatggtaaagccgtgctctatgccgacaaaatcacc
cctgcgatgaaaagcgcgatggatgaatccaaccgccgccgggtaaaacagatcgcctat
aacaaagcacatcaactgcagcctaagagctcaaaccggacgattgacccgacaataaac
gtccacatagaaaacaaagacccgtccatgtgcgccacgcttgaagagctttgccatcgc
atcacgcacactgagcgagagctattcaggctttgctcggaaaaagatgcacaaaaacgt
gctgacaccgatgcgctaaggcaagagcttgatgccctgtatcgacaatatatttttatg
tag
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