Grimontia kaedaensis: K6Q96_18360
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Entry
K6Q96_18360 CDS
T09175
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
gkd
Grimontia kaedaensis
Pathway
gkd00630
Glyoxylate and dicarboxylate metabolism
gkd00680
Methane metabolism
gkd01100
Metabolic pathways
gkd01120
Microbial metabolism in diverse environments
gkd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K6Q96_18360 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
K6Q96_18360 (fdhF)
Enzymes [BR:
gkd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
K6Q96_18360 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_9
Fer4_21
Fer4_16
Fer4_6
Fer4_2
Fer4_8
TPP_enzyme_M
Fer4_4
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
USH05183
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Position
II:332184..335057
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AA seq
957 aa
AA seq
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MVEFYIPIEQGSKDFGTPAVKCEDITQISLTIDGWPITVPEGTSVMHASSILNIQIPKLC
ATDSLEAFGSCRMCVVEIEGMRGKPAACTTPVVEGMVVTTQNEALRKLRRNVMELYISDH
PLDCLTCAVNGDCELQDMAGAVGLRDVRYGFEGSNHLNMEKDTSNPYFTFDSSKCIVCSR
CVRACGEIQGQHALTVESRGFESRIVAGSESFMDSECVSCGACVQACPTAALTENSVIEL
GTPSHYRVTTCAYCGVGCSFRAEMRGDELIRMVPHKDGKANQGHSCVKGRFAFGYATHKD
RVTDPMIRDSIDEPWRKVSWEEAIGFAADKIKAIRDKHGANALGGITSSRCTNEETYLVQ
KLVRAGFGTNNVDTCARVCHSPTGYGLKTTLGESAGTQTFESVQKADAIIVIGANPTDGH
PVFASQLKRRLRSGAKLIVIDPREIDLVNAAHVRAQYHLQLRPGTNVAVLNALAHVIINE
GLEDTSYIEERCDMAAYKKWRDFIADEHHSPEAMESATGVPAMLIREAARMFAKERNGAI
YYGLGVTEHSQGSSAVMAIANLAMATGNVGREGVGVNPLRGQNNVQGSCDMGSFPHELPG
YRHVSDPEVRALFEGEWGVPIDDEPGLRIPNMFDAAIAGRFKGMYVQGEDIAQSDPNTQH
VEAALTSLECLIVQDIFLNETAKFAHVFLPGASFLEKDGTFTNAERRISPVRKVMAPLSG
KADWEATMDLANALGYEMHYNHPSEIMDEIAKLTPTFHGVSYEKLDELGSIQWPCNDEAP
LGTPTMHIGGFVKGKGSFVVTEYVATEEKVNKRFPLLLTTGRILSQYNVGAQTRRTDNSQ
WHQEDILEIHPLDAEDRGVTDGSPVRIASRAGEITLPAKISNRMQPGVVYTTFHHPVSGT
NVITTENSDWATNCPEYKVTAVQVKVAVEQADWQQRFREFDEQQQAHLSAATQDSNN
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggttgagttctatattcccattgagcaaggcagcaaagatttcggtacgcctgctgta
aaatgcgaagacattacgcaaatatcactgaccattgatggctggccaattaccgtgcct
gaaggcacgtcggttatgcatgcgtcttccattctgaatattcaaattccaaaattgtgt
gcgaccgactcgctagaagcgtttggttcatgtcgtatgtgtgtggtggaaattgaagga
atgcgtggtaaacccgccgcctgcaccacacctgttgttgaaggcatggtggttaccacg
caaaatgaagccttgcgtaagttacgccgtaacgttatggaattatacatttcagaccat
cccctcgattgtttgacctgtgcggtgaatggcgattgtgaattgcaggatatggcaggt
gcggttggtcttcgtgacgtgcgctacggatttgaaggtagcaaccacctcaatatggaa
aaggacacttccaatccttacttcacctttgattccagcaaatgcatcgtctgttcccga
tgtgtgcgtgcctgtggagagattcagggtcaacatgcgctgacagtggaaagtcggggt
tttgaatcccgtatcgtcgctggttcagaatcgtttatggattccgaatgcgtgtcctgt
ggtgcctgcgtacaagcctgtccgacggctgcgttgacagaaaacagcgtgatagagctg
ggcaccccgagccattatcgcgtgacgacgtgtgcctattgcggcgttggctgttctttc
cgcgctgagatgcgcggtgatgaattgatccgaatggtgccgcacaaagacggcaaagca
aatcagggtcattcctgtgtgaaagggcgttttgcctttggctatgcaacccacaaagat
cgtgtaaccgacccgatgatccgcgattctattgatgaaccttggcgcaaggtaagttgg
gaagaggcgattggttttgccgcagacaagatcaaagcgatccgcgataaacacggcgcg
aatgcgctgggtgggatcacctcttcccgctgcactaacgaagaaacctatctggtgcaa
aaactggttcgcgcaggctttggcactaacaacgtggatacctgtgcgcgtgtctgtcac
tctccgacgggttatggcctgaaaaccacactgggtgaatccgcagggacacagaccttc
gaatctgtccaaaaagccgatgcgattattgttattggggccaacccaaccgatggccat
ccggtgttcgcatcccagcttaaacgtcgtcttcgtagcggcgctaaactgattgttatc
gacccacgcgaaatcgatctggtcaacgcagcgcatgttcgcgcgcaataccatcttcaa
ttgcgtccgggcaccaatgtcgccgtgttgaatgcgttggcgcacgtcatcatcaatgaa
gggttggaagacacttcttacattgaagagcgttgcgacatggcagcatacaaaaaatgg
cgcgactttattgctgatgaacatcattcaccggaagcgatggaaagcgctacaggcgtt
cccgctatgctgatccgagaagcggcgagaatgtttgccaaagaacgaaacggcgcaatc
tattatgggcttggtgtcaccgagcacagccaaggcagttcggccgtgatggcgattgcc
aaccttgctatggcaacaggtaacgtcggtcgtgaaggtgtcggtgtgaacccgttgcgc
ggccagaacaacgtgcagggtagctgtgatatgggctcgttcccacatgaactgccaggc
tatcgtcacgtgtctgatccagaagtgcgtgcactatttgaaggcgagtggggcgtaccc
attgatgatgaacccgggcttcgcattcccaacatgttcgatgccgctattgcaggtcga
tttaaaggcatgtatgtgcagggtgaagatattgcccaatctgatcccaatacccaacat
gttgaagcggcgctgacatcgctggaatgccttatcgtccaggatattttcctcaacgaa
acggcgaagtttgcgcatgtgttcctaccgggtgccagcttccttgaaaaagacggtact
tttaccaacgcagagcgccgtatctcgccggtacgcaaagtgatggcgccgctttcgggt
aaagctgactgggaagcgaccatggatcttgccaacgcccttggctacgagatgcactac
aatcatccatccgaaatcatggatgaaattgccaagctgaccccgaccttccatggtgtc
agttatgaaaagctggatgaactgggctccatccaatggccttgtaacgatgaagcgcca
ctgggaaccccaaccatgcacataggcggatttgtgaaaggcaaaggcagctttgttgtc
accgaatatgttgcaacagaagagaaggtgaataaacgcttcccattgttgctgacgact
gggcgtatcctttcccaatacaacgtcggcgcacagactcgacgtactgacaacagtcag
tggcatcaggaagacatactggaaattcaccctcttgacgcagaagatcgtggtgtcaca
gacggctctcccgttcgtattgccagccgtgcaggcgagattaccctgcctgcgaaaatc
agcaaccgcatgcagccaggtgtggtttataccaccttccaccatccggtttccggtacc
aatgtcatcaccacggaaaattcggattgggcgactaactgccctgaatacaaagtgacg
gcggtacaggtgaaagtggcagtggaacaggcagattggcagcaacgttttcgtgagttc
gatgaacagcaacaggctcatttatctgcggctacgcaagatagtaacaattag
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