Gallaecimonas kandeliae: PVT67_09275
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Entry
PVT67_09275 CDS
T09225
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
gkn
Gallaecimonas kandeliae
Brite
KEGG Orthology (KO) [BR:
gkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gkn03400
]
PVT67_09275
DNA repair and recombination proteins [BR:
gkn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
PVT67_09275
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA
zf_C2H2_13
AAA_30
SLFN-g3_helicase
zf-ribbon_3
AAA_22
DZR
AAA_16
Zot
HypA
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
WKE67401
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All DBs
Position
complement(1906089..1907768)
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AA seq
559 aa
AA seq
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MKLRPYQQEAVKATLSYFRKSRAPALLVLPTGAGKSLVIAELARLAKGRVLMLTHVAELV
AQNADKYRQLRDDGSIFSAGLKAKDARGKVVFASIQSVAPNLDAFEDDFSLVVIDECHRI
GPTEESQYRQVLAHFAKSLVLGLTATPYRLDSGWLYRFHAKGQVRSTEPKLFDYCIFELP
LRRLIDQGYLTPVRLIPAPAIRYDFSEAVESWTEAALDRALAGQGQLTPAIVDHLVALCE
GRRGVMIFAATRKHAWDILARLPEGEAALVLGDTPGPERKALIAAFKAQTLKYLVNVSVL
TTGFDAPHVDVIALMRPTQSVSLFQQMVGRGLRLFEGKTDCLVLDYAGSGFDLFSPEVGE
PRPAGTVPVTVPCPVCDFPNQFWGKVDEDGDVIEHFGRRCQGMTGPEQQCDYRFRFRLCN
QCGGEADIAARHCPHCQAVMVDVDKQLREAMKSRDQHLFRVAEMETGLDDSGLRLCYRDL
DGQPFTEYLKFKTKALRRFLAEANPAPGTLFLPDDKGLAAHLARLRQPRFLLLSKQRGWR
LGQRIFDYQGRFADHQDLG
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaggccctatcaacaggaggccgtcaaggccaccctgagctacttcaggaag
agcagggcaccggcattgctggtgctgcccaccggcgccggcaagagcctggtgatcgcc
gagctggcccgcctggccaagggccgggtgttgatgctgacccatgtggcggagctggtg
gcccagaatgccgacaagtatcgccagcttcgggacgacggcagcatcttctcggccggg
ctcaaggccaaggatgccaggggcaaggtggtattcgcctccatccagtccgtggctccc
aacctggacgcctttgaggacgatttctctcttgtggtcatcgacgagtgccaccgtata
ggccccacagaggagagccaataccggcaggtgctggcccatttcgccaagagcctggtg
ctggggctgaccgctaccccttaccgcctcgacagcggctggctttaccgtttccacgcc
aagggccaagtacgcagtaccgagcccaagcttttcgactactgcatcttcgagctgccc
ctgcggcgccttatcgatcagggctacctgacgccggtgcggctcattccggccccggcc
atccgctacgacttcagcgaggccgtagagagctggaccgaggccgctcttgaccgcgcc
ttggctggccaaggccagctgacccccgccatagtggaccacctggtggcgctctgcgaa
ggccggcgcggggtcatgatcttcgccgccacccgaaaacacgcctgggacatcctggcc
aggctgccggaaggtgaggcggccctggtgctgggagatacccctggcccagagcgcaag
gccctgatcgccgctttcaaggcgcagacactcaagtacctggtcaatgtctcggtgttg
accacaggtttcgacgccccccacgtggacgtcatagccctgatgcggcccacccagtcg
gtgtcccttttccagcagatggtgggccgtggcctgcgcctcttcgaaggcaagacggac
tgcctggtgctggactatgccggctctggcttcgatctcttcagtccagaggtgggggag
ccaaggcctgccggcacagtgcctgtgacagtgccttgccctgtttgcgacttccccaac
cagttttggggcaaggtggacgaggatggcgacgtcatcgagcactttggccgccgttgc
cagggcatgacggggcctgagcagcagtgcgactaccgttttcgctttcggctctgcaac
caatgcggcggcgaagccgacatcgcggcccgccactgcccccactgccaggcggtgatg
gtggatgtggacaagcagttgcgcgaggccatgaaaagccgcgatcagcatttgttccgg
gtcgccgagatggagactggcctggacgacagcggcctgcggctttgttaccgggacctg
gacggccagcccttcaccgagtacctcaagttcaagaccaaggccctgaggcgcttcctg
gcagaggccaacccggcgcctggcaccctgttcctgcccgacgacaagggcctggccgcc
cacttggcgcggctgcggcaaccccgttttctgctgctctctaaacagagaggttggcgc
ctaggccagcggatcttcgactatcagggccgctttgccgatcaccaggacctgggttag
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