KEGG   Gallaecimonas kandeliae: PVT67_09275
Entry
PVT67_09275       CDS       T09225                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K19789  DNA repair protein RadD
Organism
gkn  Gallaecimonas kandeliae
Brite
KEGG Orthology (KO) [BR:gkn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gkn03400]
    PVT67_09275
DNA repair and recombination proteins [BR:gkn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     PVT67_09275
SSDB
Motif
Pfam: ResIII Helicase_C DEAD SWI2_SNF2 AAA zf_C2H2_13 AAA_30 SLFN-g3_helicase zf-ribbon_3 AAA_22 DZR AAA_16 Zot HypA SNF2-rel_dom
Other DBs
NCBI-ProteinID: WKE67401
LinkDB
Position
complement(1906089..1907768)
AA seq 559 aa
MKLRPYQQEAVKATLSYFRKSRAPALLVLPTGAGKSLVIAELARLAKGRVLMLTHVAELV
AQNADKYRQLRDDGSIFSAGLKAKDARGKVVFASIQSVAPNLDAFEDDFSLVVIDECHRI
GPTEESQYRQVLAHFAKSLVLGLTATPYRLDSGWLYRFHAKGQVRSTEPKLFDYCIFELP
LRRLIDQGYLTPVRLIPAPAIRYDFSEAVESWTEAALDRALAGQGQLTPAIVDHLVALCE
GRRGVMIFAATRKHAWDILARLPEGEAALVLGDTPGPERKALIAAFKAQTLKYLVNVSVL
TTGFDAPHVDVIALMRPTQSVSLFQQMVGRGLRLFEGKTDCLVLDYAGSGFDLFSPEVGE
PRPAGTVPVTVPCPVCDFPNQFWGKVDEDGDVIEHFGRRCQGMTGPEQQCDYRFRFRLCN
QCGGEADIAARHCPHCQAVMVDVDKQLREAMKSRDQHLFRVAEMETGLDDSGLRLCYRDL
DGQPFTEYLKFKTKALRRFLAEANPAPGTLFLPDDKGLAAHLARLRQPRFLLLSKQRGWR
LGQRIFDYQGRFADHQDLG
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgaaactcaggccctatcaacaggaggccgtcaaggccaccctgagctacttcaggaag
agcagggcaccggcattgctggtgctgcccaccggcgccggcaagagcctggtgatcgcc
gagctggcccgcctggccaagggccgggtgttgatgctgacccatgtggcggagctggtg
gcccagaatgccgacaagtatcgccagcttcgggacgacggcagcatcttctcggccggg
ctcaaggccaaggatgccaggggcaaggtggtattcgcctccatccagtccgtggctccc
aacctggacgcctttgaggacgatttctctcttgtggtcatcgacgagtgccaccgtata
ggccccacagaggagagccaataccggcaggtgctggcccatttcgccaagagcctggtg
ctggggctgaccgctaccccttaccgcctcgacagcggctggctttaccgtttccacgcc
aagggccaagtacgcagtaccgagcccaagcttttcgactactgcatcttcgagctgccc
ctgcggcgccttatcgatcagggctacctgacgccggtgcggctcattccggccccggcc
atccgctacgacttcagcgaggccgtagagagctggaccgaggccgctcttgaccgcgcc
ttggctggccaaggccagctgacccccgccatagtggaccacctggtggcgctctgcgaa
ggccggcgcggggtcatgatcttcgccgccacccgaaaacacgcctgggacatcctggcc
aggctgccggaaggtgaggcggccctggtgctgggagatacccctggcccagagcgcaag
gccctgatcgccgctttcaaggcgcagacactcaagtacctggtcaatgtctcggtgttg
accacaggtttcgacgccccccacgtggacgtcatagccctgatgcggcccacccagtcg
gtgtcccttttccagcagatggtgggccgtggcctgcgcctcttcgaaggcaagacggac
tgcctggtgctggactatgccggctctggcttcgatctcttcagtccagaggtgggggag
ccaaggcctgccggcacagtgcctgtgacagtgccttgccctgtttgcgacttccccaac
cagttttggggcaaggtggacgaggatggcgacgtcatcgagcactttggccgccgttgc
cagggcatgacggggcctgagcagcagtgcgactaccgttttcgctttcggctctgcaac
caatgcggcggcgaagccgacatcgcggcccgccactgcccccactgccaggcggtgatg
gtggatgtggacaagcagttgcgcgaggccatgaaaagccgcgatcagcatttgttccgg
gtcgccgagatggagactggcctggacgacagcggcctgcggctttgttaccgggacctg
gacggccagcccttcaccgagtacctcaagttcaagaccaaggccctgaggcgcttcctg
gcagaggccaacccggcgcctggcaccctgttcctgcccgacgacaagggcctggccgcc
cacttggcgcggctgcggcaaccccgttttctgctgctctctaaacagagaggttggcgc
ctaggccagcggatcttcgactatcagggccgctttgccgatcaccaggacctgggttag

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