Giardia lamblia: GL50803_0015000
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Entry
GL50803_0015000 CDS
T01047
Name
(RefSeq) TFIIH P44
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
gla
Giardia lamblia
Pathway
gla03022
Basal transcription factors
gla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GL50803_0015000
09124 Replication and repair
03420 Nucleotide excision repair
GL50803_0015000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gla03021
]
GL50803_0015000
03400 DNA repair and recombination proteins [BR:
gla03400
]
GL50803_0015000
Transcription machinery [BR:
gla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GL50803_0015000
DNA repair and recombination proteins [BR:
gla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GL50803_0015000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
VWA
Tfb4
Motif
Other DBs
NCBI-GeneID:
5701056
NCBI-ProteinID:
XP_001708135
UniProt:
A8BAS0
LinkDB
All DBs
Position
2:558159..559379
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AA seq
406 aa
AA seq
DB search
MASFRAKKPIPTSHVEPVQPLKVEKKVSDGQTQKLFKRLAPSQQSQVGIFRHVVLIIDSS
ESLPLTYLSEFVNSLFLYVQFILSHRPLIRVAFMTLQNSLCYLELRFSSNLSAFEEVLRD
GFRPSGHIALATGLDQAYELLMNNKSAASSRRILYVNFSNATLDSLDIFSVLEKLLAAQI
QVDIVSLTNRFGVLDHISRVTGGRHLIVDRDVKGGLLNLLKRLELRSEDTRLMHSKGREE
HSLNLQASHNQTATDTEGGKFIMVGFPVHICDDAICFCHNRHGTGFYECPFCYAVVCDIS
ECVCCGLQLVMYPNLYRGALLHKRALSFKKLDTSLSQTESIVNTTNPAEDGKNIKAKSMC
SLCQMQYGTDTDTSQYLCSFCDAPFCKSCSELLAEAKVACTVCGQI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgttccgtgccaagaaacctatacccaccagtcatgtagagccggtgcaaccg
ctgaaagtggagaaaaaggtctcggatggacaaacccaaaagttgttcaaaaggctagct
ccgagtcagcaatcacaagtcggaatatttcgccacgtagtccttataattgactcatct
gaatccctcccgctaacctatctgtctgagtttgtcaatagtctctttctttatgtccag
ttcattctttcccatcggcccttaattcgggttgcctttatgaccctgcagaactcgctc
tgctatcttgagctccgcttttcgtccaacttatctgcctttgaagaggtcttgagggac
ggatttcgtccttctggtcacatagcgctggccacgggactagaccaagcctatgagctg
ctgatgaataacaagtctgcggcgtcttctcggcgaatcctatatgtcaatttctccaac
gctactctggactctcttgacatcttcagtgtattggagaagctactggccgcgcagata
caggtggatattgtttcacttacaaatcgctttggggtgctcgatcacataagccgggta
acaggcgggaggcatctcattgtggaccgtgacgtcaaaggtgggttgctcaacttgctc
aagaggctggagttgcgatctgaggacactaggctcatgcactcaaaaggaagggaagaa
cattccctgaatttacaggcctctcacaaccagactgcgacagacacggaaggagggaag
tttatcatggtgggctttcccgtacacatttgtgatgatgcaatctgcttttgtcacaac
agacatggtacaggcttctatgagtgtccgttttgttatgcagtcgtgtgtgacatctcc
gagtgcgtgtgctgtggcctgcaactggtcatgtaccccaacttgtacaggggggcactc
cttcataagcgagctctgtcgttcaagaaattagatacctctttgtctcagactgaaagc
attgtaaacactaccaacccagcagaggatggaaagaacatcaaagcgaaaagcatgtgc
tcactgtgtcagatgcaatacggaacagatacagataccagtcagtatttgtgcagtttc
tgcgacgccccgttctgcaaaagctgctccgagctgctggcagaggcgaaggtggcctgt
acggtgtgcggtcagatttga
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