Giardia lamblia: GL50803_0015048
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Entry
GL50803_0015048 CDS
T01047
Name
(RefSeq) ATP-dependent RNA helicase-like protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
gla
Giardia lamblia
Brite
KEGG Orthology (KO) [BR:
gla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gla03019
]
GL50803_0015048
03041 Spliceosome [BR:
gla03041
]
GL50803_0015048
03036 Chromosome and associated proteins [BR:
gla03036
]
GL50803_0015048
Enzymes [BR:
gla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GL50803_0015048
Messenger RNA biogenesis [BR:
gla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
GL50803_0015048
mRNA cycle factors
Common to processing body (P body) and stress granule
GL50803_0015048
Spliceosome [BR:
gla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
GL50803_0015048
Chromosome and associated proteins [BR:
gla03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
GL50803_0015048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ERCC3_RAD25_C
Thioredoxin_9
Motif
Other DBs
NCBI-GeneID:
5698382
NCBI-ProteinID:
XP_001705502
UniProt:
A8BQW1
LinkDB
All DBs
Position
5:1247356..1249326
Genome browser
AA seq
656 aa
AA seq
DB search
MSSYPERTGFKRDYDDGPGYGRRDDRGGRGGYGGGRRRDDRRGYGGGRGGYGGRGSYDDR
AGNPGDLHRRHENLYPALTEEELFGQKVGTEALQTGERDYSIYQDVKVSVDFARAIKEVA
PIATFEDLSREPFDLDPEVYQNTVRAKYFQPTPIQKHALPTGMVGYDLLACSQTGSGKTC
AFIIPILHRIATEKLKLYTMSPGHHEDRDFRFNAKGSRAYPFCIIMSPTRELVQQTAKAS
WMLSYGTSILTRVAYGGDPSGPQRDALQMGCDILVATPGRLLDFIKQGVVETTYVRFVVF
DECDRMLDMGFEPQIRDILHELPPIHHSVQDPSNPDITHQIERQTLLFSATFPKEIKNLA
MEFLRQDRLVSITVGQIGSSNPNLAQRVVLVERSNDKLRLLTEYITGQNADLNNMLIEVY
GTDKEQDPSLSTVSSTAGISEEFNEAMNATYPDSHAARHDTLNKDGIIQYQTIVFTNFKS
EADRIFRYFDDMRYRVAVIHGDMTQKERENNLKYFKAGRTNILIGTDVAQRGLDIPNVRL
VLNYDLPGNVDDYTHRIGRTGRAGRPGLAVTFVCPDRDNVGALKDIRRKMMDTKQPIPDW
FNRTIDEMLSDKRNAKSARRGGGGRGGGGGRGDRGYGGDRGYGGGRGGYGGDRGRY
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctaccccgagcgcaccggcttcaagagagactacgacgacggcccgggttat
gggcgccgtgatgaccgcgggggacgcggaggctatggaggaggccgcaggcgcgatgat
cgcaggggctatggcggaggacgcggaggatacggtgggcgtggcagctacgacgaccgt
gcggggaatcccggggatctccatcgccgccatgaaaatctgtaccctgcacttactgaa
gaggagctttttggacaaaaggttggaacggaggctttgcagacgggggagcgcgattac
tccatttaccaggacgttaaggtttcagtcgatttcgctcgggcaataaaggaggtcgca
cccattgccacattcgaggacctctcacgagagccgtttgacctggacccagaggtttat
cagaacacagttcgtgcaaagtatttccagccaacaccaatccagaagcacgccctcccc
acggggatggtcgggtatgacctcttggcttgttcccagactggttctggaaagacctgt
gcgttcataatccccattctccatcgcatagccacggagaagctgaagctctacaccatg
tctccaggacaccacgaggacagagacttccgctttaacgccaagggcagcagggcgtat
ccgttctgcatcatcatgtctcccacgcgtgaacttgtccagcagactgccaaggcgagc
tggatgcttagctatggaacatcgatactcacgagagttgcctatggcggagatccctct
ggcccccagcgggatgcgctccaaatgggctgtgacatactcgtggccactccagggagg
cttctcgactttattaagcagggggtcgttgagacaacgtatgtccgctttgttgtcttt
gacgagtgcgatcggatgcttgacatggggttcgagcctcagattcgtgacatcttgcac
gagctccctcccatccaccactctgttcaagatcccagcaatcctgacatcacgcaccag
atagagcggcagaccctcctcttctctgccacctttcccaaggagatcaagaaccttgca
atggagtttcttcgccaagacagacttgtctccatcacagtaggacagatagggtcttcc
aatccgaatctggcgcagcgcgttgtgttggttgagcgcagcaatgacaaactgcggctt
ctgacagagtatataacggggcagaatgccgacttgaacaacatgctcatagaggtatac
ggcaccgacaaggagcaggatccatccctctctacagtttctagcacggctgggatctct
gaggagtttaacgaggcgatgaacgctacctatcctgatagccatgctgcacgccatgac
actctcaataaagacgggattattcaatatcaaacgattgtcttcacaaatttcaagtca
gaggcggatcgcatctttaggtactttgatgatatgcgatatagagttgccgtcatacat
ggcgatatgacccaaaaagagcgggaaaacaatctcaagtacttcaaggctggccgcacc
aacatcctcattggtactgacgttgcacagcgaggactggacatccctaacgtcaggctc
gttctgaactatgacctgcctggaaatgtcgatgactacacacaccggatcggtcgaaca
gggcgcgctggcaggcctggtctggcagtgacgtttgtctgccctgatcgagacaatgtg
ggcgccctgaaagatatacgcagaaagatgatggacacgaaacagcccataccggattgg
ttcaacaggaccatagacgaaatgctcagtgataagcgcaacgccaagagcgcgcgcaga
ggtggtggtggccgcggcggcggcggtggtcgtggagatcgaggttatggcggcgatcga
ggttacggtggtggacgtggcggctacggcggagaccgaggaagatattaa
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