Trichlorobacter lovleyi: Glov_2278
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Entry
Glov_2278 CDS
T00708
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
glo
Trichlorobacter lovleyi
Pathway
glo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Glov_2278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glo03019
]
Glov_2278
Enzymes [BR:
glo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Glov_2278
Messenger RNA biogenesis [BR:
glo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Glov_2278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACD95994
UniProt:
B3E4Q8
LinkDB
All DBs
Position
2439415..2440773
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AA seq
452 aa
AA seq
DB search
MKFSDLSLPAQVLQGIHQAGFNACTPIQAQTLPLSLSGKDVAGQAQTGTGKTAAFLITLF
TKLLASPSAAADGSLPRPRALILAPTRELVVQIEKDAQLLGSHCGFNIQAIYGGIDYMKQ
KNALKDGADIVIGTPGRLIDYLKQKVYSLKHIEMLVIDEADRMFDMGFIPDLRYILRRLP
PFDQRQNLMFSATLNQRVMELSYEFMNVPQKVSVTPEKMTAERVEQVLYHVSNKEKFPLL
LGLLRREGMARTMLFVNTKREAERLQDRLNANEFPCRVISGDVDQRKRMNILEQFKRGEL
AILIATDVASRGLHIDGVSHVINYDLPQDAEDYVHRIGRTARAGAEGKAISLADEDGAFY
IEAIEEYIRHKVAVEWAEDDLFIHDYKRPKHRPAPVASTKQPRGQRPKAKDQKGAPRKAA
AAPPEGEKKKRRPRRKKPGGSVATREENVKTD
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagtgatctttcgctccccgcgcaggtgctgcagggaattcatcaagccggg
ttcaatgcctgcacaccgattcaggcccaaacgctccccctgtcactgagcggcaaggac
gttgccggacaggcgcagaccggcaccggcaagaccgctgccttcctgatcaccctcttc
accaaactgcttgcttcaccgtcggcagctgcagacggcagtctgccgcgtccacgggcc
ctgatcctggcaccgacccgtgagctggttgtccagattgaaaaagatgcccagctgctt
ggcagccactgcggctttaacatccaggccatttatggcggcattgattatatgaaacag
aaaaacgccctgaaagacggtgccgacattgttatcggcacgccggggcgcctgatcgac
tacctgaaacaaaaagtctactcactgaaacatattgagatgctggtgattgacgaggcc
gaccggatgttcgacatgggctttatcccggacctgcgctatatcctgcgacggctgccc
ccctttgaccaacgccagaacctgatgttttcagccactctgaaccagcgggtgatggaa
ctgtcctatgaatttatgaatgtgccgcaaaaagtctcggtcaccccggaaaagatgacg
gccgaacgggttgagcaggtgctctatcacgtttccaacaaggaaaaatttcccttgctg
cttggcctgttgcggcgtgaggggatggcccggaccatgctctttgtcaataccaaacgt
gaggcagaacgattgcaggaccggctgaatgcaaacgagtttccctgccgggtcatttca
ggggatgttgatcaacgcaagcggatgaatattcttgagcagttcaagcgtggggagctg
gcaattctgattgctacggatgttgcttcacgggggctgcatattgacggtgtttcccat
gtcatcaactacgacctgccacaggatgccgaggactacgtccaccggatcggccggact
gcacgggctggggctgaaggcaaggcgatctcgctggctgatgaagacggggccttttat
atcgaggcgattgaggagtatatcagacacaaggtagctgtagaatgggctgaagacgac
cttttcatccacgactacaagcggccgaaacatcgcccggcgccggttgcctcaaccaaa
caaccccgcgggcaacgtcctaaagccaaagatcaaaaaggtgcgccacgaaaagcagcg
gcagccccacctgaaggagaaaaaaagaaacgccgcccacgccggaaaaaaccggggggc
agcgtcgctacaagagaagaaaacgttaagaccgactag
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