KEGG   Glycomyces sp. TRM65418: K3N28_04190
Entry
K3N28_04190       CDS       T07425                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
gly  Glycomyces sp. TRM65418
Pathway
gly03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    K3N28_04190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gly03019]
    K3N28_04190
Messenger RNA biogenesis [BR:gly03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     K3N28_04190
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B_2 Lactamase_B DUF1732
Other DBs
NCBI-ProteinID: QZD56331
UniProt: A0A8G1J2S4
LinkDB
Position
complement(914752..916443)
AA seq 563 aa
MALTRPKNLGAPGALPEGALRVVPLGGLGAIGRNMTLFEYDGRLLIVDCGVLFPDVDQPG
VDLILPDFTPILDRLDDIEAIVVTHGHEDHIGAIPFLLEHKHDIPVVGSRFSVALVEAKL
RERRIKPAGIVVAENETLQLGPFGCEFLAVNHSIPDALAVAVRTEAGLVLHTGDFKMDQL
PLDGRITDLAGFARLGDQGVDLLLSDSTNAEIPGFVTSEREIGPVLDKLFQDVKGRIIVA
SFASHVHRVQQVMDAAHAHGRKVAFVGRSMVRNMAIARDLGLMQVPDGLLVSMDEAVRLP
AGEIVYMSTGSQGEPMSALGRMASGDHRHITVEAEDTVILASSLVPGNETAVYGVINRLA
RTGATVIHKDVAKVHVSGHAPAGELLYVLNVVKPSNMIPVHGEARHLQAHARLAVESGVP
EDQVIVIENGDVVDLIDGRARLVGHVPNNLVYVDGLSVGDVGEPVLSERRMLGDGGFIAA
TVVIDSENGKVVGGPTVSARGFSEDPKAFDGVLPLIDDAMERAAQDGITEAHQLQQILRR
TVGKWVNDTYRRRPMIVPHVLEV
NT seq 1692 nt   +upstreamnt  +downstreamnt
atggccctgactcgacccaagaacctcggcgccccgggagcacttcccgagggcgcgctc
cgcgtcgtcccgctcggcgggctcggcgccatcggtcgcaacatgaccctgttcgagtac
gacgggcgactgctcatcgtcgactgcggcgtgctcttccccgacgtcgaccagcccggc
gtcgacctcatcctgccggacttcacgccgatcctcgaccgcctcgacgacatcgaggcc
atcgtcgtcacccacggccacgaggaccacatcggcgcgatcccgttcctcctggagcac
aagcacgacatccccgtcgtcggatcccgcttctccgtcgccctcgtcgaggccaagctg
cgcgaacgccgcatcaagcccgccgggatcgtcgtcgccgagaacgagaccctgcagctc
ggcccgttcggctgcgagttcctcgccgtcaaccactcgatccccgacgcgctggccgtc
gcggtccgcaccgaggccggcctggtgctccacaccggcgacttcaagatggaccagctg
ccgctcgacggccgcatcaccgacctcgccgggttcgcccggctcggcgaccagggcgtc
gacctgctgctctcggactccacgaacgccgagatccccggcttcgtgacctccgagcgc
gagatcggaccggtcctggacaagctcttccaggacgtcaagggccgcatcatcgtcgcc
tcgttcgcgagccacgtgcaccgcgtgcagcaggtcatggacgccgcgcacgcgcacggg
cggaaggtcgccttcgtgggccgctcgatggtccgcaacatggcgatcgcccgggacctc
gggctcatgcaggtgcccgacgggctcctggtgagcatggacgaggcggtgcgcctgccc
gccggcgagatcgtgtacatgtccaccggttcgcagggcgagccgatgagcgccttgggc
cgcatggcctccggcgaccaccggcacatcaccgtcgaggccgaggacaccgtcatcctc
gcgtcgtcgctggtgcccggcaacgagaccgccgtgtacggcgtcatcaaccgcctggcg
cggaccggggccaccgtcatccacaaggacgtcgcgaaggtccacgtctccggccacgcc
cccgcgggcgagctgctgtacgtgctcaacgtcgtcaagccgtccaacatgatccccgtc
cacggcgaggcgcggcacctccaggcgcacgcgcggctcgccgtcgagtccggcgttccg
gaagaccaggtcatcgtcatcgagaacggcgacgtggtggacctgatcgacggccgggcg
cggctggtcgggcacgtcccgaacaacctggtctacgtcgacgggctctccgtgggcgac
gtcggcgagccggtgctcagcgagcgccggatgctcggcgacggcggcttcatcgccgcg
acggtcgtcatcgactccgagaacggcaaggtcgtcggcggccccacggtctccgcgcgc
ggcttctcggaggacccgaaggccttcgacggggtcctgccgctcatcgacgacgcgatg
gagcgcgcggcccaggacggcatcaccgaggcgcaccagctccagcagatcctgcggcgc
acggtcggcaagtgggtcaacgacacctaccgccgccgcccgatgatcgtgccgcacgtc
ctcgaagtctga

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