Glarea lozoyensis: GLAREA_00723
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Entry
GLAREA_00723 CDS
T04883
Name
(RefSeq) DNA ligase/mRNA capping enzyme, catalytic
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
glz
Glarea lozoyensis
Pathway
glz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GLAREA_00723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
glz03400
]
GLAREA_00723
Enzymes [BR:
glz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
GLAREA_00723
DNA repair and recombination proteins [BR:
glz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
GLAREA_00723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT_2
RNA_ligase
BRCT
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
19459781
NCBI-ProteinID:
XP_008083672
UniProt:
S3DT02
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MPASQRLPDDGANEEDQSQYHRNAASNEDLDEKYPNRPHNHSRTLFFGDLLTDLFNPLNE
NKKRPSGPKIARAKVGPHGPGVKSAHEVRRSIIERFISKWRTVVGNDFYPALRLILPEKD
RDRLMYGLKEKAIGKIVVRMLSIAKGSDDASDVLNWKLPAKNASTQMAGDFAGRCYELLK
GRAMINGKGDMRIAEVNELLDDLSKEGKEDAQLKIFDKFYHRMSADELMWLIRIILRQMK
IGASEKTILELWHPNAEALFNVCSSLRRVCWELTDPESILDSEDTGVELMACFQPQLAQF
QQHNFQKMVDKMGMPAENPAFWIEEKLDGERMQMHMVVDDSHPGGKRFGFWSRKGKDYTY
LYGDGYEDDNSALTRHIKNAFDPRLRNIILDGEMITWDPDIDKIVAFGTLKTAALSEQKN
PFQTSGQRPLFRVFDCLYLNDRDITRYTLRDRRKALEKVLTDVYRRIELHHYEEVQEAQA
IEPALRQVVAEASEGLVLKNPESPYRLSMRDNVWMKVKPEYMMDFGESLDCIVIGGYYGS
GRANPMKCFSFCKVGGGFRAEDYAAIRHLTGGKWVDWNRDNPPNEFIELAGGDRQLERPD
MWIKPSDSVVLEVKAASVGPSESFKTNYTLRFPRFKKLREDKDWQSALSLSEFALLKTKV
EAESSQRGFVVQAKRKMTKRLKKEVVIAGTDSKIKTPYAGPQTKVFEGLDFHVMTDMLQP
FKKSKAELEQMIKANGGSIYASPTAKEHIICIAEKRPVKVASIIKRGETNIVRPAWLFDA
IQQSEIDGPHRSRFLIPFEPTHMFHLIESSREDIEGNVDIYGDSYMRDITPLELGKLCEE
MLHPKTQDFDAGMFRLQLEERGRGIGELPGNIFGRHMIRFVSSARTDAEKDIDLFLLRTQ
FSFAGGKIAESDGADGITHFVVVDEGDEDVVSGLRRKIAERRGPVPRIVRLKWLRDSWAE
KTVLDEERYAI
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgccggccagccaaagacttccggacgacggggctaacgaggaagaccaaagccaatac
catcgaaatgctgccagtaacgaggacttagatgaaaagtatcctaatcgaccacacaat
cactcacgaactctattctttggtgatcttttgaccgatttatttaatccactgaatgag
aataagaaaagacctagtggccccaaaatcgcacgtgcaaaggttggccctcatggaccg
ggtgttaaatcagcgcatgaggttcgtcggagtatcattgagagattcatatcaaaatgg
cggacagttgttggcaatgacttctaccctgcgctgagattgatccttcctgaaaaggat
cgtgacagactcatgtatgggttgaaagaaaaagcaatcgggaaaattgttgtccggatg
ctcagtattgccaagggatccgacgatgcctcagatgttctgaattggaagttgccagcc
aagaatgcgtcgactcagatggcgggtgattttgctggaagatgctacgagctactcaag
ggacgagctatgatcaacggtaaaggtgacatgcgtattgcagaagtcaatgaattatta
gatgatctttccaaggagggaaaagaagacgcgcaactaaagatcttcgataagttctac
cataggatgagtgcagacgaattgatgtggttaattcgaatcatacttcgtcaaatgaaa
atcggagcctctgaaaagaccattctggagctctggcatcccaacgcagaagccttgttc
aatgtgtgctcgagtcttcgtcgtgtttgctgggagctcaccgacccagaaagcatctta
gactctgaggacacaggtgtcgagctcatggcttgttttcaacctcaacttgcgcaattt
cagcaacacaactttcagaaaatggtggataagatgggaatgcctgccgaaaatccagcc
ttctggattgaagagaagcttgatggggaaagaatgcagatgcacatggttgtggatgat
agtcatccaggtggaaaacgatttggattttggtcgcggaaaggtaaagattatacttac
ctgtatggtgacggctacgaggacgacaactcggccttgactcgacacatcaagaacgct
tttgatccgagactaagaaatatcattctcgacggtgagatgattacatgggaccccgac
atagacaaaatagtagctttcggtactttaaagacagccgctctatcagagcagaagaac
cctttccagacgtctggtcaacgaccgctttttagagttttcgattgtttatatctcaat
gatcgagatattacaaggtatacgctgagggatagaagaaaagctctagaaaaggtactt
actgatgtgtatcgacgaattgagctgcaccactacgaggaggtacaagaagcccaggct
atcgagccagctttacgacaagtcgtggctgaggcgtcagaaggtctcgttctcaagaat
ccagagtcaccctatcgcttaagtatgcgtgataatgtgtggatgaaagtcaagccggaa
tacatgatggatttcggagaatctctggactgtattgtcatcggtggttactatggttct
ggtcgggccaatccgatgaagtgcttctccttctgcaaagttggtggtgggtttagagca
gaagattatgcagcaatccggcacctcacaggaggcaagtgggttgattggaatcgtgac
aatccaccgaacgagttcatcgaacttgcgggtggtgacagacagctcgaaagacctgac
atgtggattaaaccatccgattctgttgttctcgaggttaaagctgcatcagtcggtcca
tctgaatctttcaagaccaactatacgttgagatttcctagattcaagaaattgcgagaa
gacaaagactggcagtctgcattatctctctctgagtttgcacttctcaaaaccaaagtc
gaggcagaatccagtcagagaggtttcgtcgttcaagccaaacgaaaaatgacgaaaaga
ctcaagaaagaggtcgtgattgcaggcacagatagcaagatcaaaacgccatacgcagga
ccacaaacaaaagtgtttgaagggttggatttccacgtcatgacagacatgctccaacca
ttcaagaaatccaaagcagaactggagcaaatgatcaaagcaaacggcggatccatctac
gccagtcccacagcaaaagagcacatcatctgtatcgccgagaagcggcccgtcaaagta
gccagtatcatcaagagaggcgaaaccaacatcgtccggccagcctggctattcgatgct
atccagcaatccgagatcgacgggccgcatcgctcaagattcctgatcccgttcgaacct
acccatatgttccacttgatcgagagttctagggaggatatcgaggggaacgtggatatc
tatggggatagttatatgcgtgatatcacgcctctagaactggggaagttgtgcgaggag
atgttacatcccaagactcaagactttgacgccgggatgtttcggctgcaactcgaagag
cgtgggcgagggattggagagttacctgggaacatctttggacggcacatgatcagattc
gtgtcgtcagcacgtacagatgcggagaaggatatcgatctctttctacttcgaacgcag
ttttccttcgcgggtggcaagattgcggaaagtgatggtgcggatgggattacgcatttt
gtggttgttgatgagggggatgaagatgtggtgagtgggttgcggaggaagattgcggaa
cgaaggggtccggtgcctaggattgtgaggttgaaatggctgcgggattcttgggctgag
aagactgttttggatgaggagagatatgctatttag
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