Glarea lozoyensis: GLAREA_01367
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Entry
GLAREA_01367 CDS
T04883
Name
(RefSeq) S13-like H2TH
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
glz
Glarea lozoyensis
Pathway
glz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GLAREA_01367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
glz03400
]
GLAREA_01367
Enzymes [BR:
glz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GLAREA_01367
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GLAREA_01367
DNA repair and recombination proteins [BR:
glz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GLAREA_01367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
Motif
Other DBs
NCBI-GeneID:
19460425
NCBI-ProteinID:
XP_008086774
UniProt:
S3CHX6
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MPEIAEIARAVHNLKRTIVGKTLAKVTAVDDANIFGKVGTSGAAVQKALSGKKVLDAGRQ
GKYFWLILSSPPHPVFHFGMAGWFHVRGDKSGHYRQNGSDVEEDPEWPPKWSKLTLETDG
SPSEAAAFTDKRRFARIRLVDCVAEDIRKTSPLKENGPDPVLDKDIFTAEYLEAKMRKKH
VPIKALLLDQANISGIGNWVGDEVLYHAKFHPEQYSDTFSTEQIQKLHSSIYYVCSTAID
ALADSSKFPDDWLFKHRWGKGKKDSTNTLPNGAKITHITVGGRTSAIVPSVQKKTGPVAG
DLKKEDAGSDGEEGAKKTKAKRATKSKKAAAKEENEDYESALEKEMPKPSVSKTKAKSAA
AKKPTKGKKAAVKEESEDEASAVEEEKPKPNVSKKRKAAVVDEEEVKTEEPSGVKGKKTK
STPAVKDEPADDTATTGRRRSGRVKK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaatagcagaaatcgcgcgcgcagtgcacaatctgaagaggactattgtaggc
aaaacacttgccaaagtcaccgccgttgacgatgcgaacatcttcggtaaggtgggtacc
tcaggggctgcagtgcaaaaagctttgagcggcaagaaagtcctagatgcaggtcggcaa
ggcaaatacttttggctcatattgtcatctccgcctcacccggtatttcactttggaatg
gcaggctggtttcacgtccgtggagataagtctggtcactatagacagaatggctcagat
gtcgaggaagacccagagtggccgcctaaatggagtaaattgactcttgaaactgatggc
tcgccgagcgaagctgctgcgtttacggataagagacggtttgcgagaattcggttggtt
gattgtgttgcggaagacattaggaagacttcgccgttaaaggaaaatggacctgatcct
gtacttgataaggatatttttactgcggaatatcttgaggcgaagatgaggaagaaacat
gtaccgatcaaagctctgctgttagatcaagctaatatcagcgggattggaaattgggtt
ggggatgaagttttataccacgccaaattccaccccgaacaatacagcgacaccttcagc
accgagcaaatccaaaagctccacagttcgatctactatgtctgctccacagccatcgat
gcattagctgactcaagcaaattccctgacgactggcttttcaaacatcgctggggaaag
ggtaagaaagactcgactaacactttgcccaatggtgctaagatcacgcatattactgtt
ggtgggaggactagtgctattgtgccgagtgtgcagaagaagactggtccagtggcgggg
gatctgaagaaggaggatgcgggtagtgatggcgaggaaggcgcgaagaaaacaaaagcg
aaaagagcgaccaagagcaagaaggctgctgcgaaggaggagaatgaggactatgagagt
gcgctggagaaggagatgcctaaacctagtgtctcgaagacgaaggcaaagagcgcggct
gcgaagaaacccaccaaaggcaagaaagcggctgtgaaggaagagtctgaagatgaggcc
agtgcagtcgaggaagaaaagcccaaaccaaatgtttcgaagaagcggaaggcggcggtt
gtggatgaggaggaagtgaaaactgaggagccgagtggtgtgaaggggaagaaaacgaaa
agtaccccagcggtgaaagatgagcctgcggatgatactgcgacgactggaaggagaagg
tctgggagggtgaaaaagtag
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