KEGG   Glarea lozoyensis: GLAREA_02519
Entry
GLAREA_02519      CDS       T04883                                 
Name
(RefSeq) RNA-binding, RBD
  KO
K14328  regulator of nonsense transcripts 3
Organism
glz  Glarea lozoyensis
Pathway
glz03013  Nucleocytoplasmic transport
glz03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:glz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GLAREA_02519
   03015 mRNA surveillance pathway
    GLAREA_02519
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:glz03019]
    GLAREA_02519
Messenger RNA biogenesis [BR:glz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     GLAREA_02519
   mRNA cycle factors
    P-body specific factors
     GLAREA_02519
SSDB
Motif
Pfam: Smg4_UPF3 RRM_1
Other DBs
NCBI-GeneID: 19461576
NCBI-ProteinID: XP_008085796
UniProt: S3D3F8
LinkDB
Position
Unknown
AA seq 594 aa
MAASSAANSSRPQANGVLPVAGSQTAGNSSKANGPKPPAPKLKVIVRRLPPGLTEAEFIS
VLGNDWKLGQGKVDYYVYKPGKDSKDPSKPSRPSRAYFHLTNENYLMTLSELVRQSVFED
AQNTFNNPCLIGPPSVEFAPYNRVPGGRRRVDARAGTIDQDSEFMSFLEGLANPTTTKDT
GADPAAEGVSGKPEKVTTTPLVQYLKDKKANKHKEAAVKAAKKQEALLAKGKASKDATAS
SEDAKRKGKEVKGDRAVERAAKEAVKILNREASAKGAEPPKKAEGSSSTTPTHPKLDLGR
VPGRQRGSVVAAHIRMLQRDLGLSPAQAHRQVRRDTADAQKAERAAATAKPAVETKEAPS
PAQSPIVPTAPKAIVTQQSNRRSRVKPPITTDDGKAPSSTPTPSTPVSSPITLLKKPEPA
PTSSVPTIQSVKSAPAQNSPRRGQSSTGPSDGATQAFIKHANPSQGVTEPLLKEAMEKFG
AVSMVEIDKRKGFAYVDFIESSSLRKAMAANPIAVAQGTVQVMQRKGTSLPPEKKVVHNQ
PQTQQVPHPPTRGGRGGRGGTIGRRGGRGGGTPRGGGMNSPQAPISAPTAPAAK
NT seq 1785 nt   +upstreamnt  +downstreamnt
atggccgcatcttcggcggcaaacagcagtcggccacaggcaaatggagtcctccctgtt
gcgggatcacagacggctggcaattcctcaaaagcaaatggccccaagcctcctgctcct
aaattgaaggttattgtccgtagactgcccccaggactgactgaggctgagtttatttcc
gtgctcggaaacgactggaaattagggcaagggaaggttgattattacgtctacaagcct
gggaaggactcgaaagacccctccaaaccctcgcgaccctcgcgcgcgtacttccatctc
acgaatgagaactatctcatgacattgtcggaactcgttcgacaatccgtctttgaggat
gcacaaaatacttttaataacccttgccttatcggcccaccgagtgtcgaatttgctccg
tataatcgagttcctggaggccggcgtcgtgtagatgcccgcgccggtaccattgaccag
gattcagagttcatgtctttcctggagggactggccaatccaactaccacgaaggatacc
ggggccgatcctgcggctgagggagtgtctggcaaaccagagaaagttactacaacaccg
ctggtgcaatacttgaaagacaagaaagcgaacaagcacaaggaggcggccgtgaaagcg
gccaagaaacaggaagccttgttggcgaaggggaaagctagtaaggacgcgactgcttcc
agcgaggatgccaaaaggaaaggaaaggaggtcaagggtgatagagcagtagaacgggca
gcgaaagaagcagtgaagatactgaatcgggaagcctcagctaagggggcagagccacca
aagaaagccgaaggctcatcctccactactccaactcaccccaagcttgaccttggcaga
gttccaggccgtcaacgaggatctgttgttgctgcccatattcgaatgttgcaacgtgac
cttggacttagtccggctcaagctcaccgtcaagttagacgggatactgctgatgcccag
aaagcagagagagctgcggctacagccaaaccagctgtcgagacgaaagaagcaccatct
cctgctcaatcacccattgtaccaaccgcgccaaaggccattgtaacgcagcagtcaaac
agaagatcacgtgtgaagccacccataacaaccgatgatggcaaagcgccctcgtctacc
cctacgccttctactcctgtctcttcgcctattactttgttgaagaagcccgaaccagca
cccacctcctctgtacctactattcaatcagtaaagtcggcaccagctcagaattctccc
agaagaggacaatctagcacgggtccttccgacggtgccacccaagcgtttatcaagcac
gctaatccatctcagggcgttactgaaccattgttgaaggaggcaatggagaagtttggc
gctgtttccatggttgagattgacaagagaaagggttttgcttatgttgacttcattgaa
tcatctagtttgcgcaaagctatggcggcaaatcctattgcggttgcccagggtactgta
caagtcatgcaaaggaaaggtacttctctgcctcctgagaagaaagttgtgcataatcag
ccacaaactcagcaagttccccatccacctactcgcggtggtcgtggaggaaggggcggg
acaattggacgaaggggtggtcgtggcgggggaacaccccgtggaggaggcatgaattct
cctcaagcaccaatatcagcaccaactgcaccagctgcgaagtga

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