Glarea lozoyensis: GLAREA_09793
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Entry
GLAREA_09793 CDS
T04883
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
glz
Glarea lozoyensis
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_09793
Enzymes [BR:
glz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLAREA_09793
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
GLAREA_09793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
PhoH
Motif
Other DBs
NCBI-GeneID:
19468840
NCBI-ProteinID:
XP_008084580
UniProt:
S3CQC8
LinkDB
All DBs
Position
Unknown
AA seq
1842 aa
AA seq
DB search
MAVVIETRDQDPLRGTASVLSWYDSTRPMFIDLVGDYAGKELFLVEGDSLLRECFEDERI
DFDSGFQILHFVYVVEKFLENLKKRHCSFHIAFFEENARLCIPPGVNTTHRSRYLLARTV
IKHHLSLRLPGAYPDVEVNVFPALKSKEFADYLHDTPIHFVMMHDGSSRSKRITEADSKE
DEDLVKILLRGAIWWWNTHRLNVSLINRIEFRDSKVFTMIVESFTASSKRKLLMTSNFTK
EIKETGQKLQNLREGDVKGTEADETDLEDLSGCPPGVTTSESYFLAAFGVSELLNNEDCD
IPLASAFILHSITLKHTALSERRLPLIKFDDAFEIVIDELLAKLSNVFQHTLEDQSWAHF
VKERQLDIDTIDIIDGRVFRAVIQAMRTTDIESKLSAGATKDWKMMSRIVMHLAEEELSM
KGSAKVKSVDIEKVKQEADPATENLAVLPFSHPVFDKHLECIHVETDNSLPAKLGSMRLF
RETTHWHNYKKPLNPKAPVVVKVSKWRNPLRMNQFYMKEMTAYAASLTGAKGKALEPETI
TVGPKHLVKIVESKPASGPAAKKLEAANKQGDKGKAVAKKGSKNAAAGLSAKDKMIADNE
KRRDVLEGNKAFSAWAMKKKEFDLISSDQERYLKTDEYLKGLDATKTNYLEGELNTYALQ
SLLSWWSEVAKTKNKSAGYHIVALIWTRIRTICGLTSAVSKDIETEVTKVCKLLGIEDVL
TQFSSSPTDRKLSFAFKYPTSTQHLRIDMSQSEFQLNHCGPYMDRNLDAKPDARVSSFVP
DGWQRDVLDQLDANKSVFVVAPTSAGKTFISFYAMEQVLRADNDGVLIYVAPTKALVNQI
AAEVQGRFSKKFNLTGKGVWAIHTRDYRIGNSTGCQILVTVPHILQIMLLSPSNSKSWAP
RVRRIIFDEIHSIGQAEDGVVWEQLLLLAPCPIIALSATVGNPEQFNDWLIETQKATGTE
LKMIQHGTRYSDLRKYMYEPPKSFKFEGFGVPNRAGLGLDGLTGFETFHPVASLVDKSRG
MPDDLALEPRDCLSLWKAMVKCQTGNFKVPSSLDPAKALPKCIRKLDIFAWEKELKKVLL
KWMADSKSPFDQVVAELMPKTGALENSNEESSPTSSIADNNTINPLDLKDTTLPLLYQLH
SRRALPAILFNYDRGQCESIAYAILAQLQEAESRWKEGSEWKRWMEGYEVYKAEKDKKSR
KPAKPAKKTKDTDDEGGSKMDRMREEATDGSSKYDLFDPEAPQAEFSFADPKKLQKSELD
DFIKALRWKDIKEELIELLKRGVGIHHSGMNRKYRQCVEMLFRKGFLRVVVATGTLSLGI
NMPCATVVFSGDSVFLTALNFRQAAGRSGRRGFDLLGNVVFQGISRERASRLLSSRLPEL
TGHFPITTTLVLRLFTLLNGSKSEYAEKAVNSLLSQPRLYLGGQSFKEQVLHHLRFSIEY
LRRNDLLGPNGEPVNFTSCVSHLYFTENSSFAFHALLKGRFFHELCADIDTKTDMVLQKM
ILVLSHLFGRRVCREIDDPEEAEAIKRSPSIVYLPSMPEEATQILRKHNKDTLEIFSTYV
KTFAAQHVKEEQNSLPLTHTHVGGSSAAQKTNGETLSNGSAKVNGNTKTETNNDSYLPSL
PAPHARSAFVALSGLGDKFDTIEDLCSSTREGVFLEAAVIPHLEIHPDETRTPLNAYLLD
FYMHGALEPLELANGIRKSDVWFVLNDFSMILATIVTSLAVYLGLGTDADPEMLDVMGSG
DTIENDGDEKLAVNTEPQESSAPMKIGTPIQPPPVMKKGKKVADDWDASEDTMTAEEDYL
KEKGMENSAVTDDEEYEQLMNVYKAFRKLKTQFDEKFYAIWA
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtgatcgaaacaagggaccaggatcccctccgcggtaccgcgtccgttctt
agctggtatgatagcacccggccgatgttcatcgacctcgtcggcgactatgcaggcaaa
gaactttttctcgttgagggcgattcccttctcagagagtgtttcgaggatgaacgcatc
gattttgactccggatttcaaattcttcattttgtctatgtggtggaaaaattcttagag
aatcttaagaagcgccattgctcgtttcatattgcattctttgaagaaaacgcccgacta
tgtattccgccgggagtcaacaccacacatcgatcacgatacctactagcgagaactgtc
atcaagcaccatttatctcttcgtctacctggagcttatccagatgtggaggtcaatgta
tttcccgccttgaagagtaaggagtttgcagactatctccacgacacgcctattcacttt
gtgatgatgcatgatggctcttctcggtccaagaggataacggaagccgactccaaggag
gatgaagatctcgtcaagatcttactcaggggcgcgatttggtggtggaatacacatagg
ctgaatgtgtcgctcattaatcgcatcgagttccgagactccaaagttttcaccatgatt
gttgagagtttcaccgcttccagcaagcgcaagcttttaatgaccagcaattttactaag
gagattaaagagacgggacaaaaattgcagaacctccgcgaaggtgatgtgaaaggaacg
gaagccgacgagacagacttggaagatctatcgggatgtccacctggtgtcacgacctcc
gaatcttactttctcgccgcctttggggtatctgaattactcaacaacgaggattgtgat
attccattagcttcggcattcatattgcacagcatcactctgaagcacacggctttgtct
gaacgccgtctgccgctaattaaatttgatgatgcattcgagatcgtaattgacgaactt
ctggcaaaattatcaaatgtctttcagcacacgctagaagatcaaagttgggctcacttt
gtgaaggaacgccagctcgacattgataccattgatatcatcgacgggcgcgtctttcgt
gcggtcatacaagcgatgcgaacaacggatattgagtcaaaactgtctgctggcgcgact
aaagactggaagatgatgtctcgcatagtcatgcacctggccgaggaagagctttccatg
aagggcagcgccaaagtgaaaagtgtggacatcgagaaagtaaagcaggaggctgaccca
gctaccgaaaacttagctgtcttgcccttctctcaccctgtatttgataagcacctagag
tgtatccatgtggaaaccgacaattcgctccccgctaagctcggctctatgcgattgttc
agagagacaactcattggcacaattacaaaaagccacttaatccgaaggctccagttgtt
gtcaaggtatcaaaatggagaaaccctctaagaatgaatcagttctacatgaaagaaatg
actgcttatgcggccagtttaacaggagccaaagggaaagcattggaacccgagaccatc
actgtcggtcctaagcatctcgtcaagattgtggagagcaagcctgcaagtggaccagca
gctaagaaactcgaggctgccaacaaacaaggagataagggcaaggcggttgcgaaaaag
ggctcaaagaacgctgcggcggggctttcggcgaaagataagatgatcgctgataatgaa
aaacgtcgcgacgttctcgaaggtaacaaggcattcagtgcctgggctatgaagaaaaag
gaattcgatttgatttccagcgatcaagaacgatatttgaaaaccgatgaatatctcaaa
ggcctggatgccacgaaaacaaactacttggagggcgaacttaacacttacgctcttcaa
tctctattatcttggtggtctgaggtcgccaagacgaaaaacaaatccgcaggatatcac
attgtagccttgatctggaccagaattcggaccatctgtggcttaacatccgctgtgagc
aaggacattgaaacagaggtcacaaaagtctgtaaacttttgggcatcgaagatgtgtta
actcaattctcctcttcgcccaccgatcgcaaactctctttcgctttcaaatatcctact
tcaacgcaacaccttcgaattgacatgtctcagtctgaattccagctcaatcattgcggc
ccatatatggaccgaaatctggatgcaaaacctgacgctcgagtctcaagtttcgttcct
gatggatggcaacgagacgttctagatcaactcgacgcaaataagagtgtattcgttgta
gctccaacatcggccggtaaaactttcatcagtttttacgccatggaacaagtcttgcga
gccgataatgacggagttttgatttacgttgcaccaaccaaagctcttgtcaatcaaatt
gccgcagaagttcagggtcgtttctcgaaaaagttcaaccttaccgggaagggtgtttgg
gcaattcatacacgtgattacagaattggtaactctacaggatgtcagattctggttacg
gtcccacatattctccaaatcatgcttctatctccctcgaattcgaagtcgtgggcgccg
agagttcgacgaatcattttcgatgaaatacactccattggacaggcagaggatggtgtt
gtttgggaacaattgctgttgctcgccccatgcccaattatcgcgctttctgccactgtt
ggcaacccagagcagtttaatgactggcttatcgaaacccagaaggctactggtacagag
ttgaagatgatccagcacggtacgagatattcagatcttcgaaagtatatgtatgagcca
ccaaagtctttcaagtttgaaggttttggtgttcctaaccgtgctggtctcggcctcgac
ggcttgaccggcttcgagacctttcaccccgttgcaagtctggttgacaaatctagaggg
atgccagatgatcttgcattggagccacgtgattgtctttccttatggaaagcaatggtg
aagtgtcaaactggtaacttcaaggtaccaagctcgctggacccagctaaagcactccca
aagtgtatccgtaaactggacatctttgcgtgggagaaggaattaaagaaggttctctta
aagtggatggccgattccaaatcaccctttgatcaggtagttgcagaattgatgcccaag
accggggctttggagaatagcaacgaagaatcttcaccgacatcatccattgctgataac
aatactataaatccactcgacctgaaagatacgacattaccactcctttatcaactacac
agccgtcgggcacttcctgctatattatttaattatgatcgcgggcagtgtgaatccatt
gcttatgccattcttgcccaacttcaggaggcagagtcccgatggaaagaaggttcggaa
tggaaaaggtggatggaaggctacgaagtgtacaaagcagagaaagacaaaaagtcacgg
aagcccgctaagcccgcaaagaagacaaaggatacagatgatgagggtggatccaaaatg
gatcgtatgcgtgaggaagctacagatggttcctccaaatatgatctatttgatccggaa
gctcctcaagcggaatttagctttgctgatcccaagaaactccaaaaatcagaacttgac
gatttcatcaaagctcttcggtggaaagatattaaggaagaattaattgaactactcaag
cgaggtgtaggtatccatcactccggtatgaacagaaagtaccgacaatgtgtggagatg
ctgttccgaaaaggcttcttacgagtcgtagttgctactggcacactgagcttgggtatc
aatatgccttgtgctactgttgtattcagtggtgactctgtttttttgacggctcttaat
tttagacaagcagctggtcgttcaggtcgtcgtggttttgatctgctcggaaatgttgtg
ttccaaggaatctccagagaaagagcaagtcgcttactgagctcaagattgcccgagcta
accggtcatttcccaattacaactactctagtcctccggcttttcacactcttgaatggc
tccaagtccgagtatgcggagaaggccgtgaactcacttttgtcacagccacgactatat
ctcggaggccaaagcttcaaagagcaggttttacatcatcttcggttttctatcgagtat
ttgcgtcgaaatgatctacttggtccgaatggagagcctgtaaattttacgagttgtgtt
tcccatctttatttcacggagaattccagttttgcgttccatgctctactcaaaggaagg
tttttccatgaactttgtgcggatattgataccaagactgatatggttctacaaaagatg
atcttggttctcagtcatctgtttggacgacgcgtgtgcagagaaattgatgatccagaa
gaggcggaagccatcaaacgatctccttccattgtgtacttgccatccatgcccgaagaa
gctacccaaattttacgcaagcataataaggataccctcgaaatcttttcaacatatgtc
aaaacattcgccgcacagcatgtcaaagaggagcaaaattcgttacctcttacccacaca
catgttggtggaagttctgcggcccagaaaacaaatggcgaaactctttcaaatggatca
gcaaaggttaatggtaataccaagaccgagacaaataatgatagctacctgccaagtctg
ccggctccgcatgcgcgatccgcctttgtagcgctttctggtcttggtgataaatttgac
accattgaagatctatgctcttctacccgagaaggagtcttccttgaagcagctgtcatt
ccgcatttggagattcatccagacgaaactaggacccctttgaacgcatatctgctcgac
ttttacatgcacggtgctcttgagccacttgagcttgccaatggcatcagaaaatccgat
gtctggttcgtcctcaacgacttctccatgatcctcgccacaatcgtaacctccctcgcc
gtctacctcggcctaggaaccgacgccgacccggaaatgctcgacgtcatgggcagcggc
gacacgatcgaaaacgacggcgacgaaaaactcgcagtcaacacggaaccgcaagaatcg
tccgcacccatgaagatcggcacgcccatccaaccccctcctgtgatgaagaaaggcaag
aaagtcgcggatgattgggacgcgagtgaggataccatgactgcggaggaagactatctg
aaggagaagggcatggagaatagtgctgtgacggatgatgaggagtatgagcagttgatg
aatgtgtataaggcgtttaggaagctgaagacgcagtttgatgagaagttttatgctatt
tgggcttag
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integrated database retrieval system
