Granulicella mallensis: AciX8_2085
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Entry
AciX8_2085 CDS
T01664
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
gma
Granulicella mallensis
Pathway
gma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AciX8_2085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gma03400
]
AciX8_2085
DNA repair and recombination proteins [BR:
gma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AciX8_2085
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AciX8_2085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
SWI2_SNF2
AAA_22
Kinesin
Microtub_bd
SLFN-g3_helicase
AAA_16
AAA
Motif
Other DBs
NCBI-ProteinID:
AEU36414
UniProt:
G8NTU0
LinkDB
All DBs
Position
complement(2474858..2476849)
Genome browser
AA seq
663 aa
AA seq
DB search
MDFQLVSDYKPAGDQPRAISEIVSGLNAGDKDQVLLGVTGSGKTFTMAKVIQELNRPALI
LAHNKTLAAQLYHEFKQFFPNNAVEYFVSYYDYYQPEAYIPAGDLYIEKESTINDELDKL
RLSATRSLFERRDAIIVSSVSCIYGLGSPEAYYGMLLLLEKGQKIKRQDITRRLVEILYE
RNDVDFRRGTFRVRGDVIEVYPTYDENAFRIELFGDEIDSLSQIDPLFGTVKQKYSRLPI
YPKSHYVVAPERKKTAIDNILSELADWEAQLEKEGRLVESQRIHQRTRFDLEMIKSVGFC
HGIENYSRHFSGRLPGEPPPTLLDYFPRDFLIFIDESHVTVPQLHGMWHGDRSRKQNLVD
YGFRLPSAMDNRPLRFEEFETRTGQIVYVSATPGPYELTKSAGVVVEQIIRPTGLVDPQV
EIRPVKGQIDDLLAEIRDRAAQNQRVLVTTLTKRMAEDLANYYTEVGVRCRYMHSEIETL
ERIKLLRDLRKGEYDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSQGSLIQTIGRAA
RHLEGRAILYADKMTDSMRRAIDETDRRREKQVAYNEEHGITPQTVIRSINDSLATVLKA
DYADLTEEDATGMPDIATQAELDTYIAKLETEMREAAKKFEFEKAAKLRDTVKELRTKEF
LFS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggactttcagctcgtctcagactacaagccagcaggcgatcagccgcgcgccatctcc
gagattgtctccggtctcaacgccggagacaaggatcaagtgctgctcggcgtcaccggt
tccggcaagaccttcaccatggccaaggtcatccaggaactgaaccgtccagccctcatc
ctcgcacacaacaagacgctggctgcgcagctttaccacgagttcaagcagttcttcccc
aataacgccgtcgaatacttcgtctcctactacgactactaccagccggaggcttacatt
cccgccggcgatctgtacatcgaaaaggaatcgacgatcaacgacgagctcgacaagctg
cgcctctccgccacgcgcagcctcttcgaacgccgcgatgccatcatcgtcagctcggtc
tcctgcatctacggcctcggctcgccagaagcttattacggcatgctgctgctgctcgaa
aagggccagaagatcaagcgccaggacatcacacgccgcctggtcgaaatcctctacgaa
cgcaacgatgtcgacttccgccgcggaacgttcagggtgcgcggcgatgtcatcgaggtc
tatccgacctacgacgaaaacgccttccgcatcgaactcttcggcgatgagatcgacagc
ctctcacaaatcgacccgctcttcggcacagtcaaacagaagtactcgcgcctgcccatc
tatcccaagtcgcactacgtcgtcgcgcccgagcgcaagaagacggccatcgacaacatc
ctcagcgagctcgccgactgggaggcccagctcgaaaaagagggccgcctggtcgagtcg
cagcgcatccaccagcgcacccgcttcgatctggagatgatcaagtccgtcggcttctgc
cacggcatcgagaactactcgcgccacttctccggacgcctgcccggcgagccgccgcca
acgctgctcgactacttccctcgcgacttcctgatcttcatcgacgagtcgcacgtcacg
gtaccgcaactgcacggcatgtggcacggcgatcgctcgcgcaagcagaacctcgtcgac
tacgggttccgcctgccctccgcgatggacaaccgcccgctgcgcttcgaagagttcgaa
acgcgcaccggacagatcgtctatgtgtccgcgactcccggcccctatgagctcaccaag
tccgccggcgttgtcgtagagcagatcattcgccccacagggcttgtcgacccgcaggtt
gagattcgccccgtcaaaggccagatcgacgatctgctcgcggagattcgcgaccgtgcc
gcgcaaaatcagcgcgtcctcgtcaccacacttaccaagcgcatggctgaagacctcgcc
aactactacaccgaggtcggcgtgcgctgccgctatatgcactccgagattgaaaccctc
gaacgcatcaagcttcttcgcgacctgcgcaagggcgagtacgacgtgcttatcggcatc
aacctgctgcgcgaaggcctggacttacctgaggtctcgctcgtcgctatcctcgacgcg
gacaaagagggcttcctgcgttctcagggatcgctgatccagaccatcggccgcgccgcg
cgccatctcgaaggccgtgccatcctctacgccgacaagatgacggattcgatgcgccgt
gccatcgacgaaaccgaccgccgccgcgaaaagcaggtggcctacaacgaagagcacggt
atcacgcctcagacggtcatccgttccatcaacgactcgctggcaacggtgctcaaggcc
gactacgccgacctcaccgaagaagacgcgaccggaatgcctgatatcgcaacgcaggcg
gaactcgacacgtatatcgccaagctggaaaccgagatgcgcgaggccgcaaagaagttc
gaattcgagaaggctgcgaaactccgcgatacagtgaaggagcttcgtacaaaagagttt
ctgttcagctaa
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