Geobacter metallireducens: Gmet_2872
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Entry
Gmet_2872 CDS
T00295
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
gme
Geobacter metallireducens
Pathway
gme02024
Quorum sensing
gme03060
Protein export
gme03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Gmet_2872 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Gmet_2872 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Gmet_2872 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gme02044
]
Gmet_2872 (ffh)
Enzymes [BR:
gme01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
Gmet_2872 (ffh)
Secretion system [BR:
gme02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Gmet_2872 (ffh)
Eukaryotic Sec-SRP protein
Gmet_2872 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
AAA_16
AAA_24
TctA
AAA_17
AAA_33
6PF2K
ATP_bind_1
ABC_tran
ParBc
AAA_5
AAA_18
AAA_31
Apc15p
Thymidylate_kin
DUF6261
RMI1_C
Motif
Other DBs
NCBI-ProteinID:
ABB33090
UniProt:
Q39RN4
LinkDB
All DBs
Position
complement(3252941..3254299)
Genome browser
AA seq
452 aa
AA seq
DB search
MFENLSDKLDLLFKKLRGQGVMTEENIKEALREVRLVLLEADVNFKVVKDFVEKVRERAV
GTQVLQSLSPGQQVIKIVQEELVALMGGGEDNSLDLAAKPPVALMMVGLQGSGKTTTCGK
LARLLKGQRRRPLLVPADVYRPAAIEQLRTLGRQLSVETFDSRADQDPVDICREALRYAT
LNGFDTVILDTAGRLQIDEYLMNELVRIKEAVQPREILFVADAMTGQEAVNVATGFNERL
DITGVVLTKLDGDAKGGAALSIRAVTGKPVKLVGLGEKLDALEVFYPDRLVSRILGMGDI
LTLVEKAQATFDATETERLQQKLKKSQFDLEDFRSQLQQIKKMGSLESILGMIPGVGKAM
KQMQGAQPSEKELKRIEAIIDSMTPGERANHQIINGSRRLRIAKGSGTTVQEVNQLLKRF
TEAQKVMKQLQKMGPKGLMRGMKGMGKGMFPF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaacctttccgacaaacttgacctcctctttaaaaagctccgcggccaaggg
gtgatgaccgaggagaacatcaaggaggcgctccgtgaggtgcggcttgtccttcttgag
gcagacgtcaatttcaaggttgtcaaggatttcgtcgagaaggtccgcgagcgggctgtc
ggcacccaggttctccagagtctctcgccggggcagcaggtcatcaagattgtgcaggaa
gagctcgtggccctcatggggggcggcgaggacaatagtctcgatcttgccgcgaagccc
ccggtcgccctcatgatggtcggtctccagggctccggcaagaccaccacctgcggcaag
ctggcgcggctcctcaaagggcagcggcggcgtccgcttctcgtgcccgctgacgtctac
cgccctgccgccattgagcagctcaggacccttggtcgtcagctttcggtggaaacgttt
gattcgcgggccgaccaggacccggttgatatctgccgcgaggcgctccgttacgccacg
ctcaatggcttcgatacggtgattctcgataccgccggtcgtctccagatcgacgagtat
ctcatgaatgagctcgtccgtatcaaggaggcggtacagccccgggagattctctttgtg
gccgacgccatgaccggccaggaggcggttaacgtcgccaccggctttaacgagaggctc
gacatcaccggcgtggtccttaccaagctggacggcgatgccaaggggggcgctgccctc
tctatccgtgcggtcaccggcaagccggtgaagctcgtggggctcggcgaaaagcttgat
gccttggaggtcttctacccggaccgcctcgtttcccgcattcttggcatgggtgatatt
ctcactctggtcgagaaggcccaggccacgttcgatgctacggaaacggagcggcttcag
cagaagctcaagaagagccagttcgatctggaggatttcaggagccagctccagcagatc
aagaagatggggtcccttgaatcgattctcggcatgattcccggcgtgggcaaggccatg
aagcagatgcagggagcccagccgtcggagaaggagctcaagcggatcgaggcgattatc
gattccatgactcccggcgagcgggcgaaccatcagatcatcaacggcagccgtcgtttg
aggatcgccaaagggagcggcacaacggtccaggaggtcaatcagctcctgaagcggttc
accgaggcacaaaaggtgatgaagcagcttcagaagatgggccccaaggggctgatgcgg
gggatgaaagggatgggaaagggaatgttccccttctga
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