Geobacter metallireducens: Gmet_2983
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Entry
Gmet_2983 CDS
T00295
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gme
Geobacter metallireducens
Pathway
gme03030
DNA replication
gme03410
Base excision repair
gme03420
Nucleotide excision repair
gme03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gmet_2983 (polA)
03410 Base excision repair
Gmet_2983 (polA)
03420 Nucleotide excision repair
Gmet_2983 (polA)
03440 Homologous recombination
Gmet_2983 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gme03032
]
Gmet_2983 (polA)
03400 DNA repair and recombination proteins [BR:
gme03400
]
Gmet_2983 (polA)
Enzymes [BR:
gme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Gmet_2983 (polA)
DNA replication proteins [BR:
gme03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Gmet_2983 (polA)
DNA repair and recombination proteins [BR:
gme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Gmet_2983 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Gmet_2983 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABB33198
UniProt:
Q39RC6
LinkDB
All DBs
Position
complement(3369686..3372364)
Genome browser
AA seq
892 aa
AA seq
DB search
MTGKQTLYLIDGSSYIYRAYYAIRHLSSPKGFPTNALYGFTQMLLKVIKDRRPDHIAVVF
DVGRTTFRTDLYPDYKANRSAMPDDLVPQIAPIKEMVRAFNIPVLELAGYEADDIIGTIA
RECEERGMEAVVVTGDKDLMQIVSERVTLLDTMKEKASGIPDVQERFGVGPEGVIDILGL
AGDTSDNIPGVPGIGEKTAIKLIQEFGSLDTLLERAGEVKGKTGEKLREFADQARLSRQL
ATIVRDVPMAFDFAAFAASSPDNRRLAELIKEYGFTTLMKELTSEATLSTEQYRTVATEE
EFEALLADLKAAGTFAVDLETTSLNPLEAEIVGISLSYRDHEACYIPVGHFYLGAPEQLP
RRRVLDALTPLLIDPKIRKVGQNLKYDYQVFRRHGIELGGVWCDTMVASYLLNPVRSGHG
LDSLAVEHLDHKMISYEEVAGKGKEQVNFAQVPVEKASTYSCEDSDAAWLLHRLFLPRVA
VWGMERLFFDVEMPLVPILAEMELAGVKLDLPLLGELSAGFGKQLAELEGRITGLAPEPF
NLNSPKQLGEVLFEKLKLPTGKKTKTKTGWSTNVEELERLAEAGHEIAALILQYRGLAKL
KSTYTDALPKLVQPATGRVHTSYNQTVTNTGRLSSSEPNLQNIPVRTEEGRRIRRAFIAE
EGHLLLSADYSQIELRVLAHFSEDRVFCDAFAKDEDIHTRTAAEVFGLFPEMVTPEMRRQ
AKAINFGVIYGQGAFSLAKQLGIATKVAREFIDNYFARHPGARAFLDGCVREAEEKGHVT
TLLGRRLPIPDIKSANGNIRAFAQRNAVNYPIQGSAADIIKEAMVKVTARMRRDVVGSRL
IMQVHDELVFEVPKGEVVAMEQLVRREMEHAVSLRVPLKVDINHGGNWSEAH
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggaaacagaccctctacctcatcgacggctcctcctatatctaccgggcctac
tacgccatccggcacctctcgtcccccaaggggttccccactaacgccctctacggtttc
acccagatgctcctcaaggtcatcaaggaccgccgccccgaccatatcgccgtggtcttc
gacgtggggcgcactacctttcgcaccgacctctaccccgactacaaggccaaccgctcc
gccatgcccgacgatctcgtcccccagatcgcccccatcaaggagatggtccgggccttc
aatatcccggtgctggagctggcggggtacgaggccgacgacatcatcggcaccatcgcc
cgggagtgcgaggagcgtgggatggaggcggtggtggtcaccggcgacaaggacctgatg
cagatcgtgagcgagcgggtcacgctcctcgacaccatgaaggagaaggcctcgggcatc
cccgacgtgcaggagcggttcggcgtcgggccggaaggggtgatcgacatcctcggcctc
gccggtgacacctccgacaacatccccggcgttcccggcatcggcgagaagaccgccatc
aaactgatccaggagttcggctccctggacacgcttctggagcgggctggcgaggtgaaa
ggaaagaccggggagaagctccgggagtttgccgaccaggcccgcctctcccggcagttg
gccaccatcgtgcgggacgtgccgatggcgtttgattttgccgcctttgccgcctcttcc
cccgacaaccggcgtctggccgagctcatcaaggagtacggcttcaccaccctcatgaag
gagctgaccagcgaggcgaccctctccaccgagcagtaccggaccgtcgccaccgaggag
gaatttgaggcgcttcttgcagatttgaaagccgccggcacctttgccgtggacctggag
accacgagcctgaaccccctggaggcggagatcgtcggcatttcactcagctaccgggac
cacgaggcgtgctacatcccggtggggcacttctatctgggggcgccggagcagctcccc
cgccggcgggtgctggacgccctgacgcccctcctcatcgacccgaaaatccgcaaggtg
gggcagaacctgaagtacgactaccaggtcttccggcgccacggcatcgagcttggcggg
gtctggtgcgacaccatggtggcctcctacctcctgaacccggtccgctccggccacggc
ctcgactccctggccgtggagcatctggatcacaagatgatctcctacgaggaggtggcg
ggaaaggggaaggagcaggtgaacttcgcccaggtgccggtggagaaagcctccacctat
tcctgcgaggactcggacgccgcgtggctcctccaccgtctcttcctcccccgggtggcg
gtgtgggggatggagcggctcttttttgatgtggagatgcccctggtgccgatcctggcc
gagatggagctggccggggtaaagctggacctcccccttctcggggaactatccgccggt
ttcgggaaacagctggcggaactggaggggcggatcacggggctcgctccggagcccttc
aatctcaactcccccaagcagctcggggaggtgctcttcgagaagctgaagctccccacc
ggtaagaagaccaagaccaagaccggttggtccaccaacgtggaggaactggagcggctg
gccgaggccggccacgagatcgcggccctcatcctccagtaccgggggctcgccaaactc
aaatccacctataccgacgccctccccaagctggtgcagccagccacgggaagggtccat
acctcctacaaccagaccgtcaccaacacggggcggctctcctcgtcggagccgaacctg
cagaacatcccggtccggaccgaggaggggcgacggatccgccgggctttcatcgccgag
gaggggcacctgctcctctccgccgactactcccagatcgagctccgggtcctggcccat
ttctcggaggaccgggtcttctgtgacgcctttgccaaagacgaggacatccacacccgc
accgccgccgaggtcttcggcctcttccccgagatggtgacccccgagatgcggcgccag
gccaaggccatcaacttcggggtcatctacggccagggggccttcagtctcgccaagcag
ctcggcatcgcaacaaaagtggccagggagttcatcgacaactacttcgcccgccatccc
ggtgcccgggcgttcctggacggctgcgtgcgggaggcggaggagaaggggcatgtgacc
acgctccttgggcgcaggctcccgattcccgacatcaagagcgccaacggtaacatccgg
gcctttgcccagcgcaacgccgtcaactaccccatccaggggtccgccgccgacatcatc
aaggaggccatggtgaaggtgacggcccggatgcggcgcgacgtcgtggggagccggctc
atcatgcaggtccacgacgaactcgtcttcgaggtgcccaagggcgaggtggttgccatg
gaacagctcgtgcggcgcgagatggagcacgccgtgagcctgcgcgtgccgcttaaagtg
gatataaaccacggcgggaactggagcgaggcccactag
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