Gulosibacter molinativorax: GMOLON4_1455
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Entry
GMOLON4_1455 CDS
T08641
Symbol
mfd
Name
(GenBank) Transcription-repair-coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
gmn
Gulosibacter molinativorax
Pathway
gmn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GMOLON4_1455 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmn03400
]
GMOLON4_1455 (mfd)
Enzymes [BR:
gmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GMOLON4_1455 (mfd)
DNA repair and recombination proteins [BR:
gmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
GMOLON4_1455 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
UvrB_inter
TRCF
Helicase_C
CarD_TRCF_RID
ResIII
MFD_D3
AAA_22
RecG_dom3_C
DUF3638
Motif
Other DBs
NCBI-ProteinID:
QUY62159
LinkDB
All DBs
Position
complement(1507960..1511556)
Genome browser
AA seq
1198 aa
AA seq
DB search
MSLHGLVAALQTSPTFANAARRAGRDADFTLVDGLRAPLIAALIEERQSILGHSPIVLAI
TATSREAEQYASDLAAFLPDAQIVEFPAWETLPHERLSPSADTTGRRLAAMRELGNWRRE
TSPERPFVLFASVRAALQPLMPGLDEPTTITLKAGSRGHDLTGIANRLVELAYQRVDMVT
RRGEFAVRGGILDVFPPDAGHALRVDFFGDAVDEIRPFGVADQRTYEDTVDEAVLTPSRE
LLLTESVRDRAREMAPEFPNIEGLLSKIAEGIPVEGMESLAPALVEKLVPIVDYLPEDAA
IGVLAPERVASRASDLRETNHEFLEAAWSAVTAGADAPIDLSGGDYVSVKELRDLKGERP
WWTFSPFGVDEAGTFHVNGDPVPSFAGNSDGAIDHTVGLVEDGWTVVMAANGQGLVERAQ
QVLAERGSAGRPVDELPAEGLETGVVYLVKAPLTAGVQLPKEKIALVTESDFYGRAVGYG
ASAPKKLARRRANAVVDPLQLKAGDHVVHDQHGVGKFLRLEQRDVPVPGTRGKKSVREYL
VIEYAPSKRGHPGDKLLVPTDQLSQLTRYVGGEDPSLSKMGGSDWAATKQKARKATKDIA
VGLVKLYSARAASKGYAFSQDTPWQHEFEEAFPFVETPDQLQTIEEVKRDMESPLPMDRL
LSGDVGFGKTEVAVRAAFKAVQDGKQVVILVPTTLLVRQHHETFTDRMAGFPVQVRAVSR
FQTAKETEDTRQGLADGSVDIVIGTHRILSDTFTYKDLGLIIIDEEQRFGVEHKEKLKSL
KTNVDVLSMSATPIPRTLEMAVTGIREMSTLATPPEDRHPILTFVGPKSDKQITAAVRRE
LLREGQVFYVHNRTATINKVAAHLSELVPEARIAVAHGRLSEKSLEQVIVDFWERKFDVL
VTTTIVETGLDIPNANTLIIDDAERYGLSQLHQLRGRVGRGRERAYAYFLYDGNRPLTET
AHDRLETIAANNELGSGMQVAMKDLEIRGAGNVLGGEQSGHIAGVGFDLYLRMIGEAVDA
FKGELPEAQTELRLELPVDARIPDTYIDSERLRLEAYQKLSAAASPGAKPGQIDLVIDEL
RDRYGEPPAEVEMLFAVSRIRRMAVKLGLSEVVAMGKNLRITPVTLAESKQLRLRRMYPG
AKYLEAGHVLNLPLPAGRMGESPSDEEIIEWVRGVFRAMFDATEESVEDAEADEAIER
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcttcacggattagtagctgcacttcagacgtctccaaccttcgcgaacgctgcg
agacgggccgggcgggatgccgattttacgctcgttgacggcctccgagccccgctcatc
gcggccctcattgaagagcgtcagagcatcctcgggcactcgcccatagtgctcgcgatc
acggcgacgagccgcgaggccgagcagtacgcgagcgacctcgcagctttcctcccggat
gcgcagatcgtcgagtttccagcgtgggagacgctcccgcacgagcggctcagcccctcg
gccgacaccacggggcgtcgcctcgcggcgatgcgcgagctcgggaactggcgtcgagaa
acgagcccggagcggccgttcgtgctgttcgcctcggtccgagcggcgctgcagccgctc
atgccggggctcgatgaacccacaaccatcacgctcaaggccggctcgcgcgggcacgac
ctgacggggatcgcgaatcgactggttgagctcgcgtaccagcgcgtcgacatggtcacc
cggcgaggcgaattcgcggtgcgcggtggcattctcgacgtctttccgccggatgcgggc
cacgcactgcgcgtcgatttcttcggcgacgcggtcgacgagatccggccattcggcgtg
gccgaccagcgcacgtatgaggacactgtcgacgaggcggtgttgacgccgagccgcgag
ctcctcctcaccgagtcggtacgcgatcgcgcgagggaaatggcgccggagttcccgaat
atcgagggactgctctcgaagatcgccgaaggcatcccggttgagggcatggaatcgctc
gcccccgcgctcgtcgagaagctcgtgccgatcgtcgactacttgcccgaggacgcggcc
atcggggtcctcgcaccggagcgggtggcgagccgcgcatccgatctgcgagagacgaac
cacgagttcctcgaggcggcgtggagtgcggtgaccgcgggcgcggatgcgccgatcgac
ctctcgggcggggactacgtttccgtcaaggagctgcgggacctcaagggggagcggccg
tggtggacgttctcacccttcggcgttgacgaggcggggacgttccatgtgaacggcgac
ccggttccctcgttcgccggcaactcggacggcgcgatcgatcacacggtggggctcgtg
gaggacggctggaccgtcgtgatggccgcgaacggccagggcctggtggagcgcgcgcag
caggtgctcgccgagcgcggctcggcagggcgccccgtggacgaacttcccgcagagggg
ctcgagaccggcgtggtctatctcgtcaaggcgccgctcaccgcgggtgttcaactgccg
aaagagaagatcgcgctcgtcaccgaatcggatttctacggccgagccgtcggttacggt
gcatccgcaccgaagaagcttgcgcgcaggcgcgcgaacgccgtggtcgacccgctgcag
ctcaaggccggcgatcacgtcgtgcacgaccagcacggcgtcggcaaattcctccgcctc
gagcagcgcgacgtgccggtgcccggcacacgcggcaagaaatcggttcgcgaatatctc
gtgatcgagtatgcgccgtcgaagcgcggtcaccctggcgacaaactgctcgtgccgacc
gatcagctctcgcagctcacccgatacgtcggtggcgaagatccgtcgctgtcgaagatg
ggcggcagcgactgggcggcgacgaagcagaaggcccgcaaggcgacgaaggacatcgca
gtcggcctcgtgaagctctactcggcgcgcgcggcctcgaagggctacgcgttctcgcag
gacacgccctggcagcacgaatttgaggaggcgttcccgttcgtcgagacgcccgatcag
ctgcagaccatcgaagaggtcaaacgggacatggagagcccgctgccgatggaccgactg
ctctcaggcgacgtgggcttcggcaagaccgaggtcgcggtgcgtgccgcgttcaaggca
gtgcaggacggcaagcaggtcgtcattctcgtgccgacgacgctgctcgtgcgccagcac
cacgagaccttcaccgaccggatggcggggttccccgtgcaggtgcgtgcggtgagccgt
ttccagacggcgaaggagactgaagacacgcggcaggggctcgccgacggctcggtcgac
atcgtgatcggtacccaccgcatcctctcggacacctttacctacaaggatctcgggctc
atcatcatcgacgaggagcagcgcttcggtgtcgagcacaaggagaagctgaagtcgctc
aagacgaacgtcgacgtgttgtcgatgagcgcgacgccgatcccgcgaacgctcgagatg
gccgtcacgggcatccgcgagatgtcgacgctcgccacccctcccgaggatcgccacccc
atcctcactttcgtgggcccgaagtcggacaagcagatcaccgccgccgtgcgtcgcgag
ctgctgcgcgagggacaggtgttctacgtgcacaatcgcacggcgacgattaacaaggtc
gccgcacacctctccgaactggtgcccgaggcccgtatcgccgtggctcacgggcggctc
tccgagaagagcctcgagcaggtgattgtcgacttctgggagcggaagttcgacgtgctc
gtgacgaccacgatcgtcgagaccgggcttgatattccgaacgcgaacacgctcatcatc
gacgacgccgagcgctacgggctcagccagctgcaccagttacgcggccgcgtcggccga
ggccgcgagcgcgcctacgcgtacttcctctacgacggcaaccgaccactcaccgagacc
gcacacgatcggctcgagacgattgccgcgaacaacgagctcggctcgggcatgcaggtc
gcgatgaaggacctcgagattcgcggcgcgggtaacgtcctcggcggcgagcagtcgggt
cacatcgctggcgtcggcttcgatctctacctgcgcatgatcggcgaggcggtggatgcg
ttcaagggcgagctacccgaggctcagaccgagctgcggctcgagctgccggtggatgcg
cgcatccccgacacgtatatcgactccgagcggctgcgcctcgaggcgtatcagaagctc
tcggcagcggcctcgccgggcgcgaagcccggccagatcgatctcgtgatcgacgagctg
cgcgaccgctacggtgagccgccggccgaggtcgagatgctcttcgcggtctcgcgcatc
cgccgaatggcggtcaagctcggcctctcggaggtcgtggcgatgggcaagaacctgcgg
atcacgcccgtcacgctcgccgagtcgaagcaactgcggctgcggcggatgtacccgggc
gcgaagtacctcgaggccggacacgtgctcaacctgccgcttccggcgggcaggatgggg
gaatcgccgagcgacgaggaaatcatcgagtgggtgcgcggcgtgttccgcgcgatgttc
gacgcgaccgaggagtcggtcgaggatgccgaggctgacgaggcgatcgaacgctag
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integrated database retrieval system
