Girardinichthys multiradiatus (darkedged splitfin): 124860109
Help
Entry
124860109 CDS
T08099
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03013
Nucleocytoplasmic transport
gmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124860109 (upf3b)
03015 mRNA surveillance pathway
124860109 (upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124860109 (upf3b)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
124860109 (upf3b)
mRNA cycle factors
P-body specific factors
124860109 (upf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
124860109
NCBI-ProteinID:
XP_047209040
LinkDB
All DBs
Position
23:complement(38336154..38341132)
Genome browser
AA seq
488 aa
AA seq
DB search
MKEDKENTRPTEKKVEIKCEDGEKTEKCKEKKEAMTKIVIRRLPPSLTKEELEEQLQPLP
EVDYMEFFSNDTSLFPHLFARAYISFKNQEDIVLFRDRFDGYVFIDNRGQEYPAIVEFAP
FQKTAKKRSKKKDSKSGTITEDPDYKRFLEYYNGDEEKLTSTPETLLEEIEARSKELEGK
RTTPLLDFLKNKQRMREEKKEERRRRELERKRLRDEERRKWREEERRKRKEVEKMKRLEK
PLENKDKDKDQIKEEPKIKLLKKPDKSDDGDYEKPKEKFKKPEKPHREDRSSGSADHKRR
QNFENKEDRERKGNGDGRKEFRERDVDRGREREKERERRLREKERIQRHDEERRRRREQQ
DGENTSRKREDEIKKQKALEKRRSENSADSPHSEKVEKPARENKKEESSKRERVRNKDRP
AIQLYQPGARSRNRTAGGGAESSSADRIPDEKGNPLLCRTTVVLKSLHTPDTMAGFLDIK
KCVHDESF
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagacaaggaaaacactcgaccgacggagaaaaaagtggagataaagtgtgaa
gatggagagaagacggagaagtgtaaagagaagaaggaggccatgacaaagattgtgatc
agaagattacctcctagtctgactaaagaagagttggaggagcagctgcagcctcttcca
gaggtggactacatggagtttttctccaacgacaccagccttttcccccatctcttcgca
agggcttacatcagtttcaaaaatcaggaggacattgttctcttcagggatcgatttgat
ggatatgtgttcatagataacagagggcaggaatatcctgctatagttgagtttgcacct
ttccagaagacagccaagaaaagaagtaagaagaaagattcaaaatctggaacgattact
gaagatcctgattacaaaaggtttcttgaatattacaatggtgatgaagagaagctgaca
tccacacctgagactctgttagaggagatcgaggcgagatcgaaggaacttgaaggcaaa
agaacaactcctctcctggacttcctgaagaataaacagagaatgagggaagaaaagaag
gaggagagaagaaggagggagcttgagcgaaagcgtctgcgtgacgaagagcgtcgcaag
tggagggaagaggagaggaggaaacgaaaagaggtagagaaaatgaaaagactcgagaaa
ccattggaaaataaagataaagacaaggaccagattaaagaagaaccaaaaattaagctc
ctgaagaagccagacaaaagtgatgatggagattatgaaaagcccaaggagaagttcaag
aaaccagaaaagccacatagagaggacagatcctcaggaagcgccgatcataagaggagg
cagaactttgaaaacaaggaggatcgagaaagaaaagggaacggagacgggaggaaggag
ttcagggagcgcgacgtggaccggggcagggagcgtgagaaggagcgggagcgtcggctg
agggagaaggagcgcatccaacggcatgacgaggagcggcggagacggagggaacagcag
gacggagagaacacgtccagaaaacgagaggatgagattaaaaaacaaaaggccttggag
aagaggaggagcgaaaactctgcagattcccctcactctgagaaggtggagaaacctgcc
agagagaacaagaaggaggagagcagtaaaagggagagagtacgtaataaggaccggcct
gccattcagctgtaccagccaggggccaggagccgcaaccgtactgcaggaggaggagcc
gaatccagctctgctgacaggataccagatgagaagggaaatccgctgctgtgcagaact
accgtggttctcaaaagtctacacacacctgataccatggcaggttttttagatataaaa
aaatgtgtccatgatgaatccttttaa
DBGET
integrated database retrieval system
