Girardinichthys multiradiatus (darkedged splitfin): 124864596
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Entry
124864596 CDS
T08099
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04120
Ubiquitin mediated proteolysis
gmu04137
Mitophagy - animal
gmu04144
Endocytosis
gmu04340
Hedgehog signaling pathway
gmu04350
TGF-beta signaling pathway
gmu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124864596
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124864596
04350 TGF-beta signaling pathway
124864596
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124864596
04137 Mitophagy - animal
124864596
09144 Cellular community - eukaryotes
04520 Adherens junction
124864596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124864596
04121 Ubiquitin system [BR:
gmu04121
]
124864596
03029 Mitochondrial biogenesis [BR:
gmu03029
]
124864596
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124864596
Membrane trafficking [BR:
gmu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124864596
Autophagy
Mitophagy
Other mitophagy associated proteins
124864596
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
HECT type E3
124864596
Mitochondrial biogenesis [BR:
gmu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
124864596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
124864596
NCBI-ProteinID:
XP_047215392
LinkDB
All DBs
Position
Y:complement(16123348..16141919)
Genome browser
AA seq
730 aa
AA seq
DB search
MSNPGSRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDPTGA
AGGGNCRLDSPGQENRLQTQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFT
DPRLHNIISHQSQVKETPQAPPMDVGVDEGGGGGVSGGGDGDVAVRYERDLVHKLKLLRH
ELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREW
LYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHSHYIN
GSFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILDNDITSVLDHTFCVEHNAFGKFSQ
HELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFDHKE
LELIIGGLGKIDLADWKANTRLKHCTGESNVVRWFWQAVEAFSEERRGRLLQFVTGSTRV
PLQGFKALQGSTGSAGPRLFTIHLIDANTENLPKAHTCFNRIDIPPYESYEKLYEKLLTA
VEETCGFAVE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcccgggagtcggagaaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaacctagccaagaaagacttctttcgcctaccggatccttttgctaaggtg
gtggtagacggatcgggtcaatgccactccacagacacagtaaagagcacactggacccc
aagtggaatcagcactatgacctctacattggaaagactgactcaatcaccatcagcata
tggaaccacaagaagatccataaacgtcagggagcaggttttttgggctgcatacgactg
ctttccaatgccatcagcaggctaaaagacacaggataccagcgtctagatctatgcaag
ctgaacccctctgacagtgatgcagtaagggggcagattgtagtgagcttacagacgcgg
gaccgcattggtagcggtggtcctgtagtggactgcagaggactgttggaaaacgatggg
cctgtttttgaggggtgtttcagtgaagagccgctgccatactccgaccccaccggcgct
gcggggggcgggaactgccggttggactcaccaggtcaggagaaccgcctgcagactcag
cgaatcagggggcaggactccagaggtcatggccacacccctcagaacaggcctcatggg
catcagccgcctgatttgccagagggttatgaacaacgaacaactgtgcaaggccaggtg
tacttcctccacacacagacaggagtcagcacctggcacgaccctcggataccacgtagg
gatctggccagtgtgagctgcgaggaactcggtccgctgccggtgggttgggaggtccga
agcactgtgtccggccgcatctactttgtggaccacaacaaccgaaccacgcagtttaca
gacccacgtctacacaacatcatcagccaccaatcccaagtgaaggaaacgccccaggcc
ccaccgatggatgttggggttgatgaggggggaggcggaggggtgagcggcggaggagac
ggagatgtagcggtgcgctacgagcgagacctggtgcataagttgaagctgctccgccac
gagctgtcgctgcagcagcctcaagcaggacactgtcgcatcgaggtgtctcgcgaagag
atctttgaggagtcgtatcgacagatcatgaagatgaggccgaaggacctgaagaaacgg
ctgatggtgaagttcagaggagaggagggccttgattacggaggagtggccagggagtgg
ctgtatctgctgtgtcatgaaatgttgaacccctactacgggctcttccagtattccacc
gacaacatctatacactacagatcaaccccgattcctccatcaaccctgaccacttgtcc
tattttcactttgtgggccgtgtgatgggcctggcggttttccacagtcactacatcaac
ggcagcttcacgctgcccttctacaagcagctgcttggaaaacccatccagctcaatgac
ctggagaccacggaccctgagttgcacaagagccttgtctggatattagacaatgacatc
acttcagtcctggatcacacattttgtgtggagcacaatgcctttgggaagttctcccaa
catgaactcaaacctaacggcagaaatattcccgtcacagaggagaacaagaaggaatat
gttagactttatgtgaactggaggttcatgcgtgggatcgaagcccagtttttggctctt
caaaaaggattcagtgagttgatcccacagcacctcctcaaaccgtttgaccacaaagaa
cttgagttaataatcggtggactcggaaagatagacctggcagactggaaggccaacacc
cgcctgaaacactgcaccggtgagagcaatgtggtgcggtggttctggcaagccgtggag
gccttcagcgaagagaggagagggcgcctcctgcagtttgtcactggctccactcgagtt
cccctgcaggggtttaaagcgctgcagggctctacaggttctgcaggaccgaggctcttc
accatccacttgatagacgccaacacagagaacctaccgaaagctcacacgtgctttaac
aggatagacatccctccctatgagtcttatgagaaactttacgagaaactgctgaccgct
gtggaggagacctgcggctttgccgtggagtga
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