Girardinichthys multiradiatus (darkedged splitfin): 124871459
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Entry
124871459 CDS
T08099
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124871459
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124871459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
U-box
zf-RING_5
zf-RING_6
zf-RING_10
Gp58
LMBR1
MRP-S31
Motif
Other DBs
NCBI-GeneID:
124871459
NCBI-ProteinID:
XP_047226727
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All DBs
Position
1:complement(47186909..47190984)
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AA seq
554 aa
AA seq
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MEQNQLDPETFSCSICLDLLKDPVTIPCGHSYCMNCIRSFWDEKEEKKSYHCPQCRQAFT
PRPVLKKSTMLADLVEQLKKTGLQVAPADHCYAGPEDVACDFCTGRKLKAIKSCLVCLAS
YCEKHLQPHYDVAPLKKHKLVEPSKNLQENICSRHDEVMKMFCRTDQKCICIICLMDEHK
GHDTVSAAAERTERQRELEVRREEIQQRIQDREKDVKLLQQEVEAINHSADKTVEDSEKI
FTELIRLIQKRSSDVKQQIRSQQETEVSRVKELQEKLEQEITELKRKDAELKQLSNTEDH
NQFLHNYPSLSALSESTHSSSINIHPLRYFEDVTAAVSELRDKLQDILRDTWTNISLTLT
EVEVLLSEPEPKSRAGFLKYSCEITLDPNTANTQLLLSEENRKVTLMDQHQSYSSHPDRF
TDWTQVLSRESLTGRCYWEVERRGGVSVAVAYKNISRTGSGNECIFGNNDKSWSLYCYQE
GYKFGHNNIWTSISGPGSSRVGVYLDHRAGLLSFYSVSETMTLLHRVQTTFTQPLHAGVY
VWYYGGSAEFCKPK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaatcaactggacccagaaaccttctcctgttcgatctgtctggatctactg
aaggatccagtgactattccctgtggacacagttactgtatgaactgtattagaagcttc
tgggatgagaaggaggagaagaaaagctaccactgtcctcagtgcaggcaggccttcaca
ccaaggcccgttctgaagaaaagcaccatgttagctgatttagtggagcagctgaagaag
actggactccaagttgctcctgctgatcactgctatgctggacctgaagatgtggcctgt
gatttctgcactggaagaaaactgaaagccatcaagtcctgtttagtctgtctggcctct
tactgtgagaaacaccttcagcctcattatgatgtggctccattaaagaaacacaagctg
gtggagccctccaagaacctccaggagaacatctgctctcgtcatgatgaggtgatgaag
atgttctgtcgtactgatcagaagtgtatctgtattatctgtttaatggatgaacataaa
ggtcacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctggaggtg
agacgagaagaaatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaa
caggaggtggaggccatcaatcactctgctgataaaacagtggaggacagtgagaagatc
ttcactgagctgatccgtctcatccagaaaagaagctctgatgtgaagcagcagatcaga
tcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggagcaggag
atcactgagctgaagaggaaagacgctgaactgaagcagctctcaaacacagaagatcac
aaccagtttctccacaactacccctcactgtcagcactcagtgagtctacacactcatcc
agcatcaatatccatcctctgagatactttgaggatgtgacagcagctgtgtcagagctc
agagataaactacaggacatcctgagagacacatggacaaacatctcactgaccctcact
gaggtggaggttttactgtcagaaccagaaccaaagagcagagctggattcttaaaatat
tcatgtgaaatcacactggatccaaacacagcaaacacacaactgttactatcagaggag
aacaggaaggtgacactgatggatcaacatcagtcttattctagtcatccagacagattc
actgattggactcaagttctgagtagagagagtctgactggacgttgttactgggaggtg
gagaggagaggaggagtttctgtagcagtcgcatacaagaacatcagcagaacaggaagt
gggaatgaatgtatatttggtaataatgacaaatcttggtcattatattgttaccaagaa
ggttataaatttggtcacaacaacatctggacctccatctcaggtcctggttcctccaga
gtaggagtgtacctggatcacagagcaggtcttctgtccttctacagcgtctctgaaacc
atgactctcctccacagagtccagaccacattcactcagccgctacatgctggagtttat
gtttggtactatggaggttctgcagagttctgtaaacccaaatag
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