Girardinichthys multiradiatus (darkedged splitfin): 124873478
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Entry
124873478 CDS
T08099
Symbol
rnf220b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220 isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124873478 (rnf220b)
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124873478 (rnf220b)
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124873478 (rnf220b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4
zf-RING_2
Pox_A_type_inc
zf-RING_UBOX
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
124873478
NCBI-ProteinID:
XP_047230112
LinkDB
All DBs
Position
9:complement(24849052..24901842)
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AA seq
552 aa
AA seq
DB search
MDLHRPFKMDSPSYLPTPLASPALMVLASTAEAGRDASVPCQAPRPFGVPVSVEKDLHLP
FPSPSYTFTSMYQRQAPMSGTFPSRDFPASLLHLHPQFTPPNLDCSTLGMLNHSGLGAFR
PFASPQEERESGGYQSAFIPAKRLKGYFPEVEGKEFDFGPLKAVEETGRKLFSMSGLLSD
GEASLSPEERKEHSKVKGHYDTQAPVCPVCQAVLQQGELQDHMEQELSKIAHLQISPATV
QQDHLIRTPKSLSLSLHIKREGVSPTSPSRPSEEPHSDRYQTFLRVRANRHTRLNVDDLC
WCRCYVKSTPLRPHSAGAHLDCTQTVRIGKLRRRKPEEGQEASADFVPVEDEWNERRRTQ
MTAIGFKGATLVSTTSKECRDSDADLDVDGDDTLEYGRVQYTETDVIPCSGESSKEPAAN
SSVLPDSRPKLDFPKWPNDGSPSTSSREKQDTSVASLPRTCRNAEIELFSEDSTPTTLDT
LKARIRDLEKQLSKGDRFKCLICMDTYTTPLTSIQCWHVHCEECWLRTLGAKKLCPQCNT
ITSPGDLRRVYL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggatctccaccgccccttcaagatggacagcccctcctatctcccaactcccctggcc
tccccggccctgatggtcctggcctccacagcagaggctggcagagatgcctccgtcccc
tgccaggcgcccaggccttttggggttccggtttctgtggaaaaggaccttcacctgccc
tttccttcaccctcctacaccttcacctctatgtaccagcgtcaggctcccatgtcgggc
accttcccttcccgggacttcccagcatcactgctccatctgcatcctcaattcacccct
ccaaacctggactgctctaccctgggcatgctcaaccacagcgggctgggggcttttcgg
ccttttgcctccccacaagaggagagggaatccgggggctaccagtctgccttcatcccc
gccaagaggctgaagggctacttcccggaagtggaggggaaggagtttgactttggaccc
ttgaaagctgtggaggagacggggaggaagttgttctccatgtctggcctgctgtctgat
ggcgaggcttcattgagcccggaggagcgcaaagaacacagtaaggtgaaaggtcactat
gacactcaggcacctgtgtgtccagtctgccaggccgtgctgcaacaaggtgagctgcag
gatcacatggagcaggagttgtccaaaattgcccatctacagatcagccccgctactgtg
cagcaggaccatctcataagaacaccaaagtctctttccctctctctgcacatcaagcgt
gaaggagtctctcccacttcaccctctcggccatctgaggaaccccactcagaccgatac
cagacgtttctcagagtgcgagccaacagacacacaagactaaatgtcgatgacctctgc
tggtgcaggtgctacgtcaaatccaccccattgcgcccacacagcgcaggagcccaccta
gactgcacacaaactgtcaggatcgggaagcttaggaggagaaaacctgaagaaggacag
gaggcttcagcagactttgtgccggtggaggacgagtggaatgagaggagaaggacgcag
atgacagctatagggtttaaaggtgcaacgctggtgagcacaacttctaaggagtgtcgg
gacagcgacgcagacctggacgttgatggagacgatactctggagtatggaagagtgcaa
tacactgagacagatgtgatcccctgctcaggagaaagctccaaagagccagcagcaaat
agcagcgtgttgcccgattccagaccgaagctcgactttcccaaatggccaaatgatggg
agtccttctacaagcagtagagagaagcaggacaccagtgtagccagtcttcccagaacc
tgcagaaacgcagagatagagctgttttcagaggactccacgccgacaaccctggacacg
cttaaagctcggatccgagacttggagaaacagctgtctaaaggagacagatttaaatgc
ctcatctgcatggacacatacacaacaccgctcacctccatccagtgctggcatgtccac
tgtgaggagtgctggctgcggaccttgggcgcaaagaagttgtgtcctcagtgcaacacc
atcacgtcacctggagacctgagacgagtttatctgtag
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