KEGG   Girardinichthys multiradiatus (darkedged splitfin): 124878032
Entry
124878032         CDS       T08099                                 
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
gmu  Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03022  Basal transcription factors
gmu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    124878032 (gtf2h2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    124878032 (gtf2h2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gmu03021]
    124878032 (gtf2h2)
   03400 DNA repair and recombination proteins [BR:gmu03400]
    124878032 (gtf2h2)
Transcription machinery [BR:gmu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     124878032 (gtf2h2)
DNA repair and recombination proteins [BR:gmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     124878032 (gtf2h2)
SSDB
Motif
Pfam: Ssl1 VWA_2 C1_4 VWA Ham1p_like zinc_ribbon_11 IBR DZR
Other DBs
NCBI-GeneID: 124878032
NCBI-ProteinID: XP_047237720
LinkDB
Position
12:214465..222736
AA seq 421 aa
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEQILYQSRRKRVTQSHAQVRLGMMRH
LYVVIDCSRSMEDQDLKPNRLTSTLKLMEGFVDEYFDQNPISQVGIIITKNKRAEKMTEL
AGNPKKHIAALKKAVDTSCVGEPSLYNSLSLSIQTLKHMPGHTSREILIILSSLTTCDPA
NIYELIKMLKSLKVRVSVIGLSAEVRVCTVLTRETGGSYHVILDESHFKELLMLHVKPPP
ASFSSECSLIRMGFPQHTVASLSDQDVKPSFSMSHLDSSSVPALSLGGYFCPQCHAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLQVFIESPAEDFQENRFCQACQGQLIDTNVSKV
PESLSPQVFQEEEQQLHFFLEILIQVFACPSCRSVFCVECDLFIHESLHCCPCCIHSRSA
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggatgaagagccagagagagcgaagcgctgggaagggggctatgaaagaacttgggag
gtgcttaaggaggatgaatctggctcccttaaagccacagtggaacagatcctataccag
tccagaagaaaacgggtgacacaaagccatgcacaagtgaggcttgggatgatgcgccac
ctctatgttgtgattgattgctcacgcagcatggaagaccaggacttaaaacccaaccgc
ctcacatctaccctgaagctgatggagggatttgttgatgaatattttgaccagaatccc
atcagtcaggttggcatcatcatcaccaaaaacaaaagggctgagaagatgactgagctt
gccggaaacccaaagaagcacattgctgctctgaagaaagcagtcgacacttcatgtgtg
ggagagccctctctgtacaactccctcagcctgtccatacagaccctcaagcacatgcct
ggacataccagccgagaaatcctcatcatcctcagcagcttgaccacatgtgacccagcc
aacatctatgagctgatcaagatgctgaagtcacttaaggtgcgagtgtcagtaattggc
ctgtcggcggaagtccgagtgtgcacagtgctgaccagagagacgggtggatcataccac
gttatcctggatgagagtcacttcaaagagttgctcatgcttcatgtcaaaccaccccca
gccagcttctcatcagaatgctctttaatacgtatgggttttcctcagcacaccgtggcc
tctctgagtgatcaggatgtcaagccttcattcagcatgtctcatctggacagcagcagt
gttccggctctgtctctgggagggtacttctgtccacagtgccatgcaaagtacacagaa
cttcctgtggagtgtaaagtctgtggcttgacgctggtgtctgccccacatctggcccga
tccttccatcacctgtttcccctccaagtgtttattgaaagtccagctgaggattttcag
gagaataggttctgtcaagcctgtcaagggcagctgatagatacaaatgtaagtaaagta
cctgaaagcttgtctcctcaggtcttccaggaagaagagcagcagctccatttcttcctg
gaaatcctgatacaagtattcgcctgtccttcgtgtcgcagtgtgttctgtgtggagtgt
gatctcttcatccacgagtccctgcactgctgtccctgctgcattcacagtcggagtgct
acatga

DBGET integrated database retrieval system