Girardinichthys multiradiatus (darkedged splitfin): 124880104
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Entry
124880104 CDS
T08099
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124880104
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124880104
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
PRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_6
U-box
zf-RING_2
zf-RING_5
zf-RING_10
BshC
DUF3584
YkyA
Motif
Other DBs
NCBI-GeneID:
124880104
NCBI-ProteinID:
XP_047240981
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Position
14:36465161..36476430
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AA seq
561 aa
AA seq
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MAGKEEQLQENQYGVNLDREQFCCSVCLDLLKEPVTIHCGHSYCRSCIENCWDEEDEKGE
YSCPQCRETFHLRPVLKRNNMLAEVVKKLKMRYPQQLPPPLTPDAPLDIACDFCGLGQNK
AIKSCLTCLASYCDKHVEPHYTIPVLQKHELISATIPIGKKVCALHRKLMDLYCQTDEEL
ICTECTVDKHKHHKFVSILELEETTKKRLETVRRQVQKKVQQREEELEMLIQAEKNVKGG
AQTAKTDCAKIFSELISSMQNRCGKVEQLIEAQEKSAVAQAGELKQQLEKDLAELRGRDT
QLLQLSCADDIVYLMQFHSISETFQDFEPGAGPPRSFTDVTACVIELKDKAEILLKETWP
KISTTVSYVDFSLPPPPNSREEFLSYWHPLNLDDTSNYPNLNVMDNNRKIRPSPVPYSPH
PNRFIRFPQVLCKEALTERCYWEVEWHARTLSAAVVYKDADRKSDESEFGKNDKSWTLEC
SENTLKFCHNNVEMKLPGSCSQKIGVFLDYKAGILSFYKVSDPMLLIFEVRTTFTQPLLP
GIGLNYEWYDTGVFAQLAKLN
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaaggaggaacaactgcaggagaatcaatacggagtcaatctagaccgtgag
cagttctgctgctcagtttgtctggatctgctgaaggagcccgtcaccatccactgcgga
cacagttactgcagaagctgcatcgagaactgctgggatgaggaggatgagaagggggaa
tacagctgccctcagtgcagggagaccttccatctgaggcctgttctgaagagaaacaac
atgctggctgaggttgtaaagaagctgaagatgagatatccccaacaactacctcctcca
ctgacccctgacgccccgctagacattgcctgtgacttttgcgggctcggacaaaacaaa
gccataaagtcttgcttgacatgcttggcatcttactgcgacaaacacgttgagcctcac
tacactatccccgtgttgcagaagcatgaactgatctcagctactatcccaatagggaaa
aaagtgtgcgccctgcatagaaagttgatggatctctactgtcagacggacgaggagctc
atctgcaccgagtgcacagtcgacaaacataaacatcacaaatttgtgtcaattttggaa
ctagaggagacaacaaagaaacgtctggagacagttcgaaggcaagtgcaaaagaaagtg
cagcaaagagaagaagagctggagatgctcatacaagctgagaagaatgttaagggcggt
gctcagactgcaaagactgactgtgccaagatcttctccgagttgatttcctccatgcag
aacagatgcggtaaagtggagcagctgatagaagcccaggagaaaagtgccgtcgctcag
gccggggagctgaagcagcagctggagaaggacctcgctgagctgagggggagggacacc
caactgttgcagctttcctgtgctgacgacattgtttacctgatgcagtttcactccatt
tcggaaacgtttcaagactttgaaccgggcgctggtcctccacgctcattcacagatgtg
actgcctgtgtgattgagctaaaagacaaagcagaaattttgctgaaggagacatggccc
aagatctcaactacagtctcttatgtggatttctccctaccaccaccacccaacagcaga
gaggagtttttaagttattggcatccccttaaccttgatgacacatcaaattaccctaac
ctgaacgtgatggacaacaaccgtaaaataaggccttcacctgtcccatattctcctcat
ccaaacagatttatcaggttcccacaagtgctttgcaaagaggctttaacggaacgatgt
tactgggaggtggagtggcacgctcgcaccctgtctgcggctgtagtttacaaagacgcc
gaccgaaaatcggatgagtcggagtttgggaaaaatgacaagtcttggactttagagtgc
tcagaaaatactctgaagttttgtcacaataatgttgagatgaaattacctggttcttgc
tcccaaaagattggagtgttcttggattacaaagcaggaattttgagtttctataaagtc
tctgacccaatgcttctaatctttgaagttcggaccacattcactcagcctcttcttcct
ggtattgggctgaactatgaatggtatgatactggagtatttgcacagctggctaaattg
aattag
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