Girardinichthys multiradiatus (darkedged splitfin): 124880985
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Entry
124880985 CDS
T08099
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124880985
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124880985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-C3HC4
zf-RING_UBOX
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
zf-RING_6
Prok-RING_4
U-box
C5HCH
V_ATPase_I
Gp58
Motif
Other DBs
NCBI-GeneID:
124880985
NCBI-ProteinID:
XP_047242411
LinkDB
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Position
14:complement(11465365..11467724)
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AA seq
548 aa
AA seq
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MAQRGAQLEKISCTICLGLLRDPVTIPCGHSYCRNCIKDFYDGEDQRRIQSCPQCRRTFK
QRPVLEKNIMLADLVEDLKRTGLQAAPADHCYAGPEDVACEVCTGRKIKAVKSCLTCPAS
YCRDHLQPHYDAPSLQKHKLVDPSKKLQENICSRHDEVMKIFCRTDQQCICYLCSMDEHK
GHETISAAAERTEKQKELQVSRQQIQQRIQDQEKDLKLLQQEVEAINVSADKAVEDSEKI
FTEMIHLIQKRGSDVKQQIRSQQETEVSRVKDLQEKLEQEITELKRKDAELKQLSTTDDH
NQFLHNYPSLSALSESTHSSSINIHPLRYFEDVTAAVSELRDILQDILRDTWTNISLRVT
EVDVLLPQPEPKTKAGFLKYSQEITLDPNTANRKLLLSEGNRKVTLMKEKQSYPDHPDRF
TDVKQVLSRESLTGRCYWEVEWRGGVEVAVSYKNISRAGRSDKCRFGSNDNSWSLYCNKN
SYTFYHNNIKTPVSGPVSSRIGVYLDHRAGILSFYSVSKTMTLLHRVQTTFTQPLHAGVW
VLAGWIFC
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagaggagctcagctggagaaaatatcatgtaccatctgtttgggtctactg
agggatccagtgactattccctgtggtcacagctactgtaggaactgtattaaagacttc
tatgacggagaagatcagagaagaatccagagctgccctcagtgcaggagaactttcaag
caaaggcctgttctggagaagaacatcatgttggcggacttggtggaggatctgaagagg
actggactccaagctgctccagctgatcactgctatgctggacctgaagatgtggcctgt
gaggtctgcactgggaggaagattaaagctgtcaagtcctgcttaacctgtcctgcttcc
tactgtagggatcacctccaacctcactatgatgctccatcattacagaagcacaagctg
gtggatccctccaagaagctccaggagaacatctgctctcgtcatgatgaggtgatgaag
atcttctgtcgtactgatcagcagtgtatctgttatctctgctctatggatgaacataaa
ggtcatgaaacaatctcagctgcagcagaaaggactgagaagcagaaggagctccaggtg
agtcgacaacaaatccagcagagaatccaggaccaagagaaagatctgaagctgcttcaa
caggaggtggaggccatcaatgtctctgctgataaagcagtggaggacagtgagaagatc
ttcactgagatgattcatctcatccagaaaagagggtctgatgtgaagcagcagatcaga
tcccagcaggaaactgaagtgagtcgagtcaaagatcttcaggagaagctggagcaggag
atcactgagctgaagaggaaagatgctgagctgaagcagctctcaaccacagatgatcac
aaccagtttctccacaactacccctcactgtcagcactcagtgagtctacacactcatcc
agcatcaatattcatcctctgagatactttgaggatgtgacagcagctgtgtcagagctc
agagatatattacaggacatcctgagagacacatggacaaacatctcactgagagtcact
gaagtggatgttttactaccacaaccagaaccaaagaccaaagctggattcctaaaatat
tcacaagaaatcactctggatccaaacacagcaaacaggaagttgttattatctgagggg
aacagaaaggtaacattaatgaaagaaaaacagtcttatcctgatcatccagacagattc
actgatgttaaacaggttctgagtagagagagtctgactggtcgttgttactgggaggtg
gagtggagaggaggagttgaagtagcagtttcatacaaaaacatcagtagagcaggaagg
tctgataaatgcaggtttggatccaatgacaattcgtggtcattatattgtaacaaaaac
agttacacattttatcacaacaacattaaaactccagtatcaggtccagtttcctccaga
ataggagtgtatctggaccacagagcaggtattctgtctttctacagcgtctctaaaacc
atgactctcctccacagagtccagaccacattcactcagcctctacatgctggagtttgg
gttttagcaggttggatcttctgctga
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