Girardinichthys multiradiatus (darkedged splitfin): 124881002
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Entry
124881002 CDS
T08099
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124881002
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124881002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_10
C5HCH
zf-RING_6
Prok-RING_4
PaRep2a
LMBR1
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
124881002
NCBI-ProteinID:
XP_047242436
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Position
14:complement(11423035..11424774)
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AA seq
552 aa
AA seq
DB search
MDQRVQLNQDNFSCSICLDLLKDPVTIPCGHSYCRNCIKTHWNGEDQRRIYSCPQCRKEF
IPRPVLEKNIMFAALVEDLKKTGLLDAPADHCYAEPEDVACDVCTGRKRKAVKSCLFCPA
SYCRNHLQPHYDAPPLKKHKLVDPSKKLQENICSHHDKVMMIFCRTDQQCICYLCSMDEH
KGHETVPAAAERTEKQKELQVSRQQIQQRIQDQEKDLKLLQQEVEAINVSADKAVEDNEK
IFTEMIHLIQKRSSDVKQQIRSQQETEVSRVKDLQEKLEQEITELKRKDAELKQLSNTED
HNQFLHNYPSLSALSESTHSSSINIHPLRYFEDVTAAVSELRDKLQDILRDTWTNISLRV
TEGDVLLSEPEPKTRAEFLKYSQEITLDPNTTNRKLLLSDRNRKVTRMKQQFYPDHPDRF
TDVKQVLSRESLTGRCYWEVEWRGRGVDVAVSYKNISRAGESKRCVFGLNDKSWSLYFDT
NSYTFYHNNIKIPVSGPVSSRLGVYLDHRAGILSFYRVSETMTLLHRVKTTFTQPLYAGI
GLFYVGCSAEFI
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggatcagagagttcagctgaaccaagataacttctcatgttccatttgtttggatcta
ctgaaggatccagtgactattccctgtggacacagctactgtaggaactgtattaaaacc
cactggaatggagaagatcagaggagaatctacagctgtcctcagtgcaggaaagagttc
ataccgaggcctgtcctggagaagaacatcatgtttgctgctctagtggaggatctgaag
aagactggacttctagatgctccagctgatcactgctatgctgaacctgaagatgtggcc
tgtgatgtctgcactgggaggaagcgaaaagctgtcaagtcctgtttattctgccctgct
tcttactgtaggaatcacctccaacctcactatgatgctccaccattgaaaaagcacaag
ctggtggatccctccaagaagctccaggagaacatctgctctcaccatgataaggtgatg
atgatcttctgtcgtactgatcagcagtgtatctgttatctctgctctatggatgaacat
aaaggtcatgaaacagtcccagctgcagcagaaaggactgagaagcagaaggagctccag
gtgagtcgacaacaaatccagcagagaatccaggaccaagagaaagatctgaagctgctt
caacaggaggtggaggccatcaatgtctctgctgataaagcagtggaggacaatgagaag
atcttcactgagatgatccatctcatccagaaaagaagctctgatgtgaagcagcagatc
agatcccaacaggaaactgaagtgagtcgagtcaaagatcttcaggagaagctggagcag
gagatcactgagctgaagaggaaagatgctgagctgaagcagctctcaaacacagaggat
cacaaccagtttctccacaactacccctcactgtcagcactcagtgagtctacacactca
tccagcatcaatattcatcctctgagatactttgaggatgtgacagcagctgtgtcagag
ctcagagataaactacaggacatcctgagagacacatggacaaacatctcactgagagtc
actgaaggagatgttttactgtcagaaccagaaccaaagaccagagctgaattcttaaaa
tattcacaagaaatcactttggatccaaacacaacaaacaggaagctgttattatctgat
aggaacagaaaagtaacaagaatgaaacaacaattttatcctgatcatccagacagattt
actgatgttaaacaggtcctgagtagagagagtctaactggacgttgttactgggaggtg
gagtggagaggaagaggagttgatgtagcagtttcatacaagaacatcagcagagcagga
gagtcaaaaagatgtgtatttggattaaatgacaaatcttggtcattatattttgacaca
aacagttacacattttatcataacaacattaaaattccagtatcaggtccagtttcctcc
agactaggagtgtatctggaccacagagcaggtattctgtctttctacagagtctctgaa
accatgactctcctccacagagtcaagaccacattcactcagcctctatatgctgggatt
ggacttttttatgttggatgttctgctgagtttatttaa
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