Glycine max (soybean): 100781333
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Entry
100781333 CDS
T01710
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100781333
09122 Translation
03013 Nucleocytoplasmic transport
100781333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100781333
03041 Spliceosome [BR:
gmx03041
]
100781333
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100781333
Spliceosome [BR:
gmx03041
]
Complex C
Other components
EJC/TREX
100781333
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100781333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
100781333
NCBI-ProteinID:
XP_003522894
UniProt:
A0A0R4J354
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Position
4:complement(18142516..18181420)
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AA seq
605 aa
AA seq
DB search
MEVFKRAIIQPGPPESFALRTVQEVIKPQKQTKLAQDENQFLENILRMLLQEFVSAAVQF
GEKIMQFGQSIDSSETTQGHIPRLLDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMKNCKD
IFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSE
RSALNIKGVFNTSNETKYEKEPLEGICIDFNFYQTFWGLQEYFSNPTSISHAPAKWQKFT
LSLSVVLNTFEAQPLSDEEGDANNLEEEAVNFSIKYLTSSKLMGLELKDPSFRRHVLVQC
LILFDYLKAPGKGDKDLPSENMKEEITSWEERVKKLLELTPPKGTEFLHKIEHILEREKN
WVWWKRDGCLPYEKQRIEKKAVPDGPKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRV
QTPSIMEYWKPLAEDMDPSAGIEADYHHKNNRVYCWKGLRLSARQDLEGFSKFTDHGIEG
VVPLELLPPDVRSKYQAKPNDRSKRSKKEETKGTAHQIEENQIATNATEIDGDGIRTDTT
ATSMEFDAATAPGTQGGTTTPEELQKLSSDTDGGQEAGQLEADAEVEAGMIDGETDADVD
LDTVG
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaggtattcaaaagggccataatacagcctgggccaccggaaagttttgctttgagg
acggttcaagaagtaattaagcctcagaaacaaacaaaattggcccaagatgagaaccag
ttcctagaaaatattctacgtatgttgcttcaggagtttgtgtcagcagcggtacagttt
ggggagaaaatcatgcaatttggccaatcaattgattctagtgaaactacccagggccac
attccccgccttcttgatattgtgctatatctttgtgagaaagaacacattgaaggtggt
atgatttttcagctgttggaagacttgacagaaatgtctacaatgaaaaactgcaaagat
atttttggttatatagagagtaagcaagatatattgggcaagcaagaactttttgctcga
ggaaaacttgtgatgctgagaacctgcaatcagcttcttcgtcgactgtcaaaggcaaat
gatgtggtcttttgtggaagaattctcatgtttctagctcatttctttccgttatcagag
cgatcagccttaaatatcaaaggagtttttaacacatcaaacgaaacaaaatatgaaaaa
gaacccttggaaggcatatgtattgatttcaatttttatcagactttttggggtctacag
gaatatttttctaaccctacttccataagtcatgctccggcaaagtggcagaaatttacc
ttgagtttgtcggttgtactgaatacatttgaagcacaacctttgagtgatgaagaagga
gatgccaataatttggaggaagaggcagttaattttagtataaaatatcttacaagcagc
aaactaatgggtctagagttaaaagatccaagttttcgacgccatgttcttgtacagtgt
cttatattgtttgattacttgaaggcccctggaaaaggtgacaaggatttgccatctgaa
aacatgaaagaagagattacatcatgggaggaacgtgttaaaaaacttcttgaactgaca
ccaccaaaagggacagaatttcttcacaaaattgagcatatattggaacgagaaaaaaat
tgggtgtggtggaaacgtgatggctgcctcccatatgaaaaacaacgtatagagaagaaa
gcagtaccagatgggcccaagaaacgtaggccaagatggagattgggtaataaagaactg
tctcagttgtggaaatgggcagatcaaaatccgaatgctttaactgatcctcaacgtgtt
caaacaccttcaattatggagtactggaaacccttggctgaagatatggatccctctgct
ggaatagaagccgattatcatcacaagaataacagggtttattgttggaaaggtcttagg
ctttcagcacgacaagacttggagggattttctaagtttactgatcatggcattgaaggg
gttgtccctctagaacttttgccacctgatgtccgatctaaataccaagctaaaccaaat
gacagaagtaagcgtagtaaaaaggaagaaacaaaaggcactgcccatcaaattgaggaa
aatcagattgctacaaatgcaactgagatcgatggtgatggcattagaacagataccaca
gcaacatctatggaatttgatgctgcaactgcccctggtacacaaggtgggaccacaacg
cctgaagaacttcagaagctcagctcagacactgatggtggtcaggaagcaggccaattg
gaagctgatgccgaagttgaggccggaatgatagatggagagacagatgcagatgttgat
ttagatactgttggctga
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