KEGG   Glycine max (soybean): 100781333
Entry
100781333         CDS       T01710                                 
Name
(RefSeq) THO complex subunit 1
  KO
K12878  THO complex subunit 1
Organism
gmx  Glycine max (soybean)
Pathway
gmx03013  Nucleocytoplasmic transport
gmx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100781333
  09122 Translation
   03013 Nucleocytoplasmic transport
    100781333
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100781333
   03041 Spliceosome [BR:gmx03041]
    100781333
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100781333
Spliceosome [BR:gmx03041]
 Complex C
  Other components
   EJC/TREX
    100781333
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100781333
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 100781333
NCBI-ProteinID: XP_003522894
UniProt: A0A0R4J354
LinkDB
Position
4:complement(18142516..18181420)
AA seq 605 aa
MEVFKRAIIQPGPPESFALRTVQEVIKPQKQTKLAQDENQFLENILRMLLQEFVSAAVQF
GEKIMQFGQSIDSSETTQGHIPRLLDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMKNCKD
IFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSE
RSALNIKGVFNTSNETKYEKEPLEGICIDFNFYQTFWGLQEYFSNPTSISHAPAKWQKFT
LSLSVVLNTFEAQPLSDEEGDANNLEEEAVNFSIKYLTSSKLMGLELKDPSFRRHVLVQC
LILFDYLKAPGKGDKDLPSENMKEEITSWEERVKKLLELTPPKGTEFLHKIEHILEREKN
WVWWKRDGCLPYEKQRIEKKAVPDGPKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRV
QTPSIMEYWKPLAEDMDPSAGIEADYHHKNNRVYCWKGLRLSARQDLEGFSKFTDHGIEG
VVPLELLPPDVRSKYQAKPNDRSKRSKKEETKGTAHQIEENQIATNATEIDGDGIRTDTT
ATSMEFDAATAPGTQGGTTTPEELQKLSSDTDGGQEAGQLEADAEVEAGMIDGETDADVD
LDTVG
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggaggtattcaaaagggccataatacagcctgggccaccggaaagttttgctttgagg
acggttcaagaagtaattaagcctcagaaacaaacaaaattggcccaagatgagaaccag
ttcctagaaaatattctacgtatgttgcttcaggagtttgtgtcagcagcggtacagttt
ggggagaaaatcatgcaatttggccaatcaattgattctagtgaaactacccagggccac
attccccgccttcttgatattgtgctatatctttgtgagaaagaacacattgaaggtggt
atgatttttcagctgttggaagacttgacagaaatgtctacaatgaaaaactgcaaagat
atttttggttatatagagagtaagcaagatatattgggcaagcaagaactttttgctcga
ggaaaacttgtgatgctgagaacctgcaatcagcttcttcgtcgactgtcaaaggcaaat
gatgtggtcttttgtggaagaattctcatgtttctagctcatttctttccgttatcagag
cgatcagccttaaatatcaaaggagtttttaacacatcaaacgaaacaaaatatgaaaaa
gaacccttggaaggcatatgtattgatttcaatttttatcagactttttggggtctacag
gaatatttttctaaccctacttccataagtcatgctccggcaaagtggcagaaatttacc
ttgagtttgtcggttgtactgaatacatttgaagcacaacctttgagtgatgaagaagga
gatgccaataatttggaggaagaggcagttaattttagtataaaatatcttacaagcagc
aaactaatgggtctagagttaaaagatccaagttttcgacgccatgttcttgtacagtgt
cttatattgtttgattacttgaaggcccctggaaaaggtgacaaggatttgccatctgaa
aacatgaaagaagagattacatcatgggaggaacgtgttaaaaaacttcttgaactgaca
ccaccaaaagggacagaatttcttcacaaaattgagcatatattggaacgagaaaaaaat
tgggtgtggtggaaacgtgatggctgcctcccatatgaaaaacaacgtatagagaagaaa
gcagtaccagatgggcccaagaaacgtaggccaagatggagattgggtaataaagaactg
tctcagttgtggaaatgggcagatcaaaatccgaatgctttaactgatcctcaacgtgtt
caaacaccttcaattatggagtactggaaacccttggctgaagatatggatccctctgct
ggaatagaagccgattatcatcacaagaataacagggtttattgttggaaaggtcttagg
ctttcagcacgacaagacttggagggattttctaagtttactgatcatggcattgaaggg
gttgtccctctagaacttttgccacctgatgtccgatctaaataccaagctaaaccaaat
gacagaagtaagcgtagtaaaaaggaagaaacaaaaggcactgcccatcaaattgaggaa
aatcagattgctacaaatgcaactgagatcgatggtgatggcattagaacagataccaca
gcaacatctatggaatttgatgctgcaactgcccctggtacacaaggtgggaccacaacg
cctgaagaacttcagaagctcagctcagacactgatggtggtcaggaagcaggccaattg
gaagctgatgccgaagttgaggccggaatgatagatggagagacagatgcagatgttgat
ttagatactgttggctga

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