Glycine max (soybean): 100782388
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Entry
100782388 CDS
T01710
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100782388
Enzymes [BR:
gmx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100782388
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
100782388
NCBI-ProteinID:
XP_003551943
UniProt:
I1MYL5
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Position
18:858039..860396
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AA seq
405 aa
AA seq
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MEIPIPIPLSSMLLFLLLVPCCICSSPLQDPELVVEDVQKSINASRRNLAFLSCGTGNPI
DDCWRCDPNWEKNRKRLADCSIGFGKHAVGGRDGKLYVVTDPGDHPVNPKPGTLRYGVIQ
EEPLWIIFKRDMVIKLKQELMMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHD
CKQGGNAYVRDSPTHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAIT
ISNNYMTHHNKVMLLGHSDTFTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWRMYAIGGSAAPTINSQGNRFLAPNDNTFKEVTKRENSPQSKWKNWNWRSNGDLMLNGA
FFTASGAGASSSYARASSLAAKSSSLVSSITASAGSLRCRKGSRC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaaattccaattccaattccactctcatctatgttactctttctacttcttgtacct
tgctgcatttgctcttccccacttcaagatcctgaactagtggtcgaagatgtacaaaag
agcattaatgcctcaaggaggaacttagcatttctttcttgtgggacggggaaccccatt
gatgattgttggagatgtgaccccaattgggaaaagaaccggaagcgtctggcagattgt
tccattgggtttggtaaacatgctgttggaggaagggatggaaaactatatgtggtgact
gaccctggtgatcaccctgtgaaccccaagccaggaacacttagatatggtgtgatccaa
gaggagccattgtggatcatattcaaacgtgacatggtgatcaagctcaagcaagagcta
atgatgaattctttcaagactattgatggtagaggagtaagtgtgcacattgctggtggc
ccttgcattactatacaatatgtgaccaacattatcattcatgggattaacatccatgac
tgcaagcaaggagggaatgcctatgtgagggactctcctacacactatgggtggaggact
ctctcggatggtgatggagtgtcaatctttggtgggagtcatgtttgggtggaccactgc
tctctctccaattgccgtgatgggctaattgatgccatccatggatccacggccatcacc
atatccaacaattacatgacccaccataacaaggttatgcttttgggtcacagtgacact
ttcactagggacaagaacatgcaagtcaccattgcctttaaccattttggagaagggcta
gtgcagagaatgccaagatgcaggcatggatacttccatgtggtgaacaatgactacacc
cattggagaatgtatgccataggggggagtgctgccccaactatcaatagccaagggaat
agatttcttgctcccaatgacaataccttcaaagaggtgacaaagagggagaattcacca
cagagcaagtggaagaattggaattggaggtcaaatggagatttgatgttaaacggtgcg
ttttttacggcatctggagcaggcgcatcttcaagttatgcaagagcatccagtttggca
gcaaaatcatcttcacttgtgagttctataacagcatcagctggatcacttagatgcaga
aagggttcacgctgctga
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