Glycine max (soybean): 100784255
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Entry
100784255 CDS
T01710
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
gmx
Glycine max (soybean)
Pathway
gmx03022
Basal transcription factors
gmx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100784255
09124 Replication and repair
03420 Nucleotide excision repair
100784255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100784255
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100784255
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100784255
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100784255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
MetRS-N
Motif
Other DBs
NCBI-GeneID:
100784255
NCBI-ProteinID:
XP_003542754
UniProt:
I1M0B8
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Position
13:complement(28819021..28826231)
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AA seq
451 aa
AA seq
DB search
MPEVRIIAKNFMDMVASMPAMKLDKLYENGFICEAILRSLLPLAKKYVIQMLHIDVSVAA
KLLEEWVLPGGVSKHRVAIDRLVQLRVFLEAVDRKNEKTYKVNPTFQRSLQKLLVQGGTL
PRESMPSNITVRLPTLENLEAYALEQWECFLLQLISPSQVEKPLNISSSLMKVFQRRILS
YRDKEAPKLTESGFQFLLMDTNAQLWYIIREYISNSEDRGVDAADLISFMLELSFHDIGE
AYSVDTLTSFQRTIINDLADLGLVKIQQGRKGSWFIPTKLATNLSMSLADSSSRKQGFVV
VETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESLYSAFENGITAEQIITFL
QQNAHPRVAERIPSVPENVTEQIRLWEADLNRVEMTDAYYYDEFPSRDVFEGACDCAREW
NGLLWEDSKKMHMVVKTEVHQYVRDYLRRQK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgccagaggttagaatcattgccaagaatttcatggacatggtggcttccatgcccgcc
atgaagctcgataagctctatgaaaacggattcatctgtgaagctattctcaggtctctt
ctgcctcttgcgaagaaatacgtcatacagatgctgcatattgatgtgtcagtggcagct
aaattgttggaggaatgggtgcttccgggtggagtttcaaagcacagagtggccattgat
aggttggttcaattgagagttttccttgaagctgttgacaggaagaatgaaaagacttac
aaagttaatccaacatttcagagaagtctccaaaaacttttagtacaaggtggaactttg
ccaagggaatcaatgccttctaatattactgtgaggctcccaaccttagagaatcttgag
gcttatgctctagaacaatgggagtgtttcttattgcaacttataagcccaagtcaggtt
gaaaagcccttgaatattagctcttccctgatgaaggttttccagcggcgtatcctgagt
tacagagacaaagaagctccaaaattaactgaaagtggtttccagtttttgctgatggat
acaaatgcacagctttggtacatcatcagagaatatatatctaattctgaggatagaggt
gttgatgcagctgaccttatctcattcatgctggaacttagttttcatgacattggggag
gcatatagtgttgacacattgactagttttcagaggaccataattaatgacctagcagac
cttggtttggtaaaaattcagcagggcaggaaaggaagttggtttatacctacaaaattg
gcaaccaatctttcaatgagcttggctgattcatcatctagaaaacagggatttgtggtt
gtggaaacaaattttagagtttatgcttactcaacttctaaattacattgtgagatattg
cggctattctcaagggtagagtatcaacttccaaatcttattgttggggctattacaaaa
gaaagcttgtatagtgcttttgaaaatggcattacagcagagcagataatcactttcctt
cagcaaaatgctcatcctcgtgttgcggagaggataccatctgtgcctgaaaatgtcaca
gaacagattaggctgtgggaagcagatctaaacagagttgagatgacagatgcatactat
tacgatgagttcccttccagagatgtgtttgaaggagcctgtgactgtgctagagaatgg
aatggtttgttgtgggaagattcaaagaagatgcacatggtggttaagactgaggtacat
cagtatgtacgagattatttgcgccgtcaaaagtag
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