Glycine max (soybean): 100806467
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Entry
100806467 CDS
T01710
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100806467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100806467
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100806467
Spliceosome [BR:
gmx03041
]
Complex A
U2 snRNP components
U2 related factors
100806467
Complex B
100806467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
100806467
NCBI-ProteinID:
XP_040862460
LinkDB
All DBs
Position
11:complement(855918..860998)
Genome browser
AA seq
1107 aa
AA seq
DB search
MDEGKHKSRKENHEVKDGDSKRSHRDRDRDRTGERGKDKNDGRHRDKEKRDRESRRHERE
STDSEDRYDRDREKLKDKDKDVDRERGRDKKRERDRERERTDRVREKERERERKEDKERI
RERERERKDHEREKEKERERGRKARGREKRREVDSDCSDGESKERDRKRHRKEDGDYKRE
RERSVSKSSRKSEEHEGSPRKKSGGDDSDTKDEEKKPTREEEMEDEQKRLDEEMEKRRRR
VQEWQELRRKREEAEREKHGEASANEPESGKTWTLEGESDDEEGPGTGKQTGMDVDEDDK
PADKEPKDVMVVDTVNGTIASDLQDGPAGAPEDEEIDPLDAFMNSMVLPEVEKLNNAVTS
SLSGKAIDVKPKDKGNEQNRGAQSRKVSNKSIGRIIPGEESDSDYADDEVEKDPLDEDDD
EFMKRVKKTKAEKLSLVDHSKIVYEPFKKNFYIEVKEVSKMTPEESAVYRKQLELKIHGK
DVPKPIKSWHQTGLASKILETIKKMNFEKPMPIQAQALPVIMSGRDCIGIAKTGSGKTLA
FVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAKVLGLRCVPVYGGSGV
AQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLHRVTYLVMDEADRMFDMGFEPQITR
IVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPDNER
FLRLLEILGEWYEKGKILIFVHSQEKCDSLFKDLLRHGYPCLSLHGAKDQTDRESTISDF
KSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISE
EEARYAPDLLKALELSEQTVPNDLKALAGSFMAKVNQGLEQAHGTGYGGSGFKFNEEEDE
VRKAAKKAQAKEYGFEEEKSDSEDEDEGIRKAGGDISQHSAFAQIIAATKGNVPALPTPM
LLPSLPVLPGTGLPLPANEGAARAAAIAALNLQDKLDKIRSEALPEHYEAELEINDFPQN
ARWKVTHKETLGPISEWSGAAITTRGQFFPPGKIPGPGERKLYLFIEGPTEHSVKSAKAD
LKRVLEDITNQAMQLPGGTQPGKYSVV
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggatgagggaaagcataaatcgaggaaagaaaatcatgaggtgaaagatggggattct
aagaggagtcaccgcgatcgtgaccgtgatagaactggagaaaggggtaaggataaaaac
gatgggaggcacagggataaggagaagagggatcgtgagtcccgaagacatgagagagag
agtactgattctgaagacaggtatgatagagacagggagaagctcaaagataaagataag
gatgtggaccgagaaagaggtcgagacaagaaaagggaaagggacagggaaagggagagg
actgacagagtaagagagaaagaaagagagagggaaagaaaagaggataaggagaggatc
agagagagagaaagagaaaggaaggatcatgagagagagaaggaaaaggaaagagaaagg
gggaggaaagcacgagggagggagaagcgtagggaagttgatagtgattgcagtgatggt
gaatctaaggagcgggatagaaagcggcataggaaagaggatggtgattacaagagagag
agggaaaggagtgtcagcaagtcaagcagaaaatctgaggaacatgaaggaagcccaaga
aaaaagagtggcggagatgattcagataccaaagatgaagagaaaaaacctacccgtgaa
gaggagatggaggatgaacaaaagaggttggatgaagaaatggaaaagcggaggaggaga
gttcaagagtggcaagagctaaggaggaagagggaagaagcagaaagagaaaaacacggt
gaagcaagtgctaatgaacctgagtctggaaagacctggacgcttgaaggggaatctgat
gatgaagaaggaccaggtactgggaagcagacaggtatggatgttgatgaagatgacaaa
cctgctgataaggagcctaaggatgtgatggtggtagatactgttaatgggacaattgca
tctgatttacaggatggacctgctggtgctcctgaagatgaggaaatagatccattggat
gctttcatgaattctatggttctacctgaagttgaaaagctaaacaatgctgtgacatcg
tcactttctggtaaagccatcgacgtaaaacccaaggataaagggaatgagcaaaatcgt
ggtgcacagtcaaggaaagtttcaaataagtctattggcagaataattcctggtgaagag
tctgactcagattatgcagatgatgaagtggagaaggatccattggatgaagatgatgat
gagttcatgaaaagagtgaagaagacaaaagctgagaagctttctttggttgaccactca
aagatcgtctatgaaccattcaagaaaaacttttatattgaagtgaaggaggtctcgaag
atgactcctgaagaatctgcagtatacaggaagcagttggagttgaagatacatggaaag
gatgtgccaaagccaataaaatcatggcaccagactggacttgctagcaaaattttggag
acaataaagaagatgaactttgaaaagccgatgcctattcaagctcaggcgctccctgta
atcatgagcggtcgagattgcatagggattgctaaaactgggtcaggcaaaacacttgct
tttgttctgccaatgctgaggcatatcaaggatcagccacctgttgttgctggagatgga
cctattgggctcattatggcccctacaagggaactagttcaacagattcacagtgatata
aagaaatttgctaaggtactgggtctgaggtgtgtgcctgtgtatggaggatctggtgtt
gctcaacaaattagtgagttgaaacgtggtgctgagatagtggtttgtactccaggtagg
atgattgacatactatgtaccagtagtggaaaaataactaacttgcatagagtaacttat
ctggtaatggatgaggctgatcgaatgtttgacatgggttttgaacctcaaatcacacgt
attgttcagaatattcgtccagatcgtcaaacagttctgttttctgctactttcccccgt
caggttgaaattctggctcgtaaggtcttgaataaacctgttgaaatacaagttggtggg
aggagtgttgtgaacaaagacataacacagctagttgaggtgaggccagataatgaaagg
ttccttagactcttagaaatattgggggaatggtatgaaaaaggaaagattttgatattt
gttcactcacaggagaaatgtgatagtttgttcaaagatctgctcaggcatggttatccc
tgcctttctcttcatggggccaaggaccagacagaccgtgaatccacaatatctgatttt
aaaagcaatgtctgcaatttattggttgcaacaagtattgctgccaggggattagatgtt
aaggagcttgaattggtgatcaattttgatgttcctaaccactatgaagattatgtacat
cgtgttgggcgcactggacgagctggccggaagggttgtgccattacatttatttctgag
gaagaggcaagatatgcacctgatctgctgaaagccttggagctatctgagcagactgtt
ccaaatgatctgaaagctcttgctggtagctttatggcaaaagttaatcaaggactggag
caagctcatgggactggttatggaggcagtggctttaaatttaatgaagaggaagatgag
gtgcggaaagcagcaaagaaagcacaagccaaggaatatgggtttgaagaagagaagtca
gattctgaagatgaagatgaaggtattaggaaggctggcggtgatatctcacagcattct
gcttttgctcagattatcgctgccactaaaggtaatgttcctgcattgcctactccaatg
ctcctaccatccttgccagttttgcctgggacagggctacctcttcctgcaaacgagggg
gcggctcgagcagcagcaatagctgctctaaacttgcaggacaaattagataaaatacga
tcagaagcattaccagagcattacgaggctgagttggaaataaatgattttccccaaaat
gctcgctggaaagttacacacaaggaaactttaggccctatttctgaatggagtggagct
gcaattaccaccagggggcagtttttcccacctggcaaaatcccaggacccggggaacgc
aaactctacttgttcattgaaggtcctactgagcattctgttaagtcagctaaagcagac
ttgaagcgcgttttggaagacatcacaaatcaggctatgcaacttcctggtggaactcaa
ccaggcaaatactctgttgtgtaa
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