Geomonas nitrogeniifigens: KP003_03730
Help
Entry
KP003_03730 CDS
T07937
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt00260
Glycine, serine and threonine metabolism
gnt00400
Phenylalanine, tyrosine and tryptophan biosynthesis
gnt01100
Metabolic pathways
gnt01110
Biosynthesis of secondary metabolites
gnt01230
Biosynthesis of amino acids
Module
gnt_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KP003_03730 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
KP003_03730 (trpB)
Enzymes [BR:
gnt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
KP003_03730 (trpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
QXE87524
LinkDB
All DBs
Position
861255..862445
Genome browser
AA seq
396 aa
AA seq
DB search
MDTPDNSGHFGRFGGRYVSETLMPALLELEQAYHHFRNEKGFQEEYAYYLRQYVGRPNPL
YFAEKLSRKMGGAKIYLKREDLNHTGAHKVNNTIGQGLLAKRMGKKKVIAETGAGQHGVA
TATVAALFGMECEVFMGVEDIRRQSLNVFRMKLLGAKVTPVSSGTATLKDAMNEAMRQWV
THVDDTFYIIGTVAGPHPYPVMVRDFQAIIGQEARAQHLEAEGRLPDYLVAAVGGGSNAI
GLFHPFVKDESVQMIGVEAAGYGIDSGRHAAPLSAGSVGVLHGNKTYLLQDEFGQIAHAH
SISAGLDYPGVGPEHSYLKEIGRASYVSVTDDEALDAFQVLTREEGIIPALESSHAVAHA
LRLAPTLSANESIVVCLSGRGDKDIHTVADVMGVQL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
ttggatacgcctgacaacagtggacacttcggacgtttcggcggcagatacgtctcggaa
acgctcatgccggcgctgctcgaactcgagcaagcctaccaccattttcgcaacgaaaag
gggttccaggaggagtacgcctactacctgcgccagtatgtcggccgtcccaacccgctc
tacttcgccgagaaactgagccggaaaatggggggcgcgaagatctatctgaagcgcgag
gacctgaaccacaccggcgcgcacaaggtgaacaacaccatcggccagggcctgctcgcc
aagcggatggggaagaagaaggtgatcgccgagaccggcgccggtcagcacggtgtggcg
acggcgaccgtcgcggcgctcttcggcatggagtgcgaggtgttcatgggcgtggaggac
atccgtcgccagtccctgaacgttttcaggatgaagcttctcggcgccaaggtcaccccg
gtcagttccggcaccgcgaccctgaaggacgccatgaacgaggcgatgcgccagtgggtg
acccacgtggatgacaccttctacataatcggcaccgtcgccggcccccatccctacccg
gtcatggtgcgcgacttccaggccatcatcggccaggaggcgagggcgcagcacctggaa
gccgaagggaggcttcccgactacctggtcgccgcggtcgggggaggaagcaacgccatc
gggctcttccatcccttcgttaaagatgaatcggtgcagatgatcggcgtcgaagcggcc
ggctacggcatcgacagcggcaggcacgcggcgcctctgtccgccggcagcgtcggggta
ctgcacggcaacaaaacgtatctcctgcaggacgagttcggtcagatcgcccacgcccat
tccatttcggccggattggactacccgggcgtgggaccggaacactcgtacctgaaggag
attggacgggccagctacgtctccgtcaccgatgacgaggccctggacgccttccaggtg
ctgacccgcgaggaggggatcatccccgccctggagtcttcccacgcagtcgcccatgca
ctgcgtctggctccgacactttccgccaatgagagcatcgtcgtctgtctgtcgggcagg
ggcgataaggacatccataccgtggccgatgttatgggggtgcagctttaa
DBGET
integrated database retrieval system
