Geomonas nitrogeniifigens: KP003_19420
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Entry
KP003_19420 CDS
T07937
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt00010
Glycolysis / Gluconeogenesis
gnt00020
Citrate cycle (TCA cycle)
gnt00620
Pyruvate metabolism
gnt00650
Butanoate metabolism
gnt01100
Metabolic pathways
gnt01110
Biosynthesis of secondary metabolites
gnt01120
Microbial metabolism in diverse environments
gnt01200
Carbon metabolism
gnt01210
2-Oxocarboxylic acid metabolism
Module
gnt_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
KP003_19420 (nifJ)
00020 Citrate cycle (TCA cycle)
KP003_19420 (nifJ)
00620 Pyruvate metabolism
KP003_19420 (nifJ)
00650 Butanoate metabolism
KP003_19420 (nifJ)
Enzymes [BR:
gnt01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
KP003_19420 (nifJ)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_9
Fer4_8
Fer4
Fer4_21
Fer4_10
Fer4_17
Fer4_16
Fer4_6
Fer4_2
Transketolase_C
Fer4_4
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
QXE86499
LinkDB
All DBs
Position
4385635..4389351
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AA seq
1238 aa
AA seq
DB search
MSGTRKTMDGNTAAAHVAYALSETAAIYPITPSSTMGEVADEWAAEGRKNIFGQTLNIKE
LQSEAGAAGAVHGSLAAGALTTTFTASQGLLLMLPNMYKIAGEQLPGVFHVSARAIATHA
LSIFGDHQDVMAARPTGFAMLCSCSVQEVMDLALVAHLAALEGSLPFLHFFDGFRTSHEV
QKIEVIGYEEMARLVNYEKLAAFRRKAMNPEHPELRGTAQNPDIYFQGRERANPFYQALP
QIVTATMEQVGQLTGRQYRLFDYVGHAEADRVIVTMGSSCETAEEVVQYLNGKGEKVGLV
KVRLFRPFASDALFSAIPPSARKITVLDRTKEPGSLGEPLYQDVCTAFLERGGEIPELYA
GRYGLGSKEFRPVHVKSIFENMNGRPGRRHFTVGITDDVSDSSLPAEGTLSTTPEGTIQC
RFWGMGADGTVGANKAAIKIIGDNTDLYVQAYFSYDSKKSGGITVSHLRFGESPIQSTYL
VDAADFISCQKAPYVQIYDLLEGIKEGGTFLLNSPWNSVEAMEANLPATMRRAIARKKVR
LYNVDAISIAQSAGLGGRINMIMQTAFFKLSGVLPFERAVELLKDSIRKEYGRKGDQVVD
MNLSAVDLAVESLVEIPYPDSWREADDRHGTDFRLNQQMPGYMRDMVFPILRQKGDDLPV
SSFTPDGVFPFSTARYEKRGVAINVPEWIKENCIQCNQCAYICPHATIRPFVATDGELAG
APGTYQTIPVNARELKGMGFRIQVYPLDCMGCGNCADICPAKVPALVMKPIDTQAAVQEE
NRKFAETLSPKGHLVKRTTVIGSQFQQPLLEFSGACSGCGETPYARIITQLFGERMMIAN
ATGCSSIWGASAPVSPYCANAEGHGPAWNNSLFEDAAEFGFGYHMAVSQRRSLLADQVRR
AVHHLPEGELREELAAWLAGMMDPELSRRHGDRLKELLPKAGDNELLQGIAASADLFTKK
SIWIYGGDGWAYDIGFGGLDHVISTGEDVNLLVMDTELYSNTGGQCSKATQLGAIARFAA
AGKRTSKKDLGRMAMTYGYVYVASIAIGADKNQTLRAITEAEAYPGPSLIIAYSTCINQG
LRKGMGKSIEESQLAVKCGYWPLYRYNPLLKLEGKNPFILESKKPDGSLSEFLSGEVRFQ
ALEKQNPEVAQMLRKQMEKEAMERFRMFRDMADWQPSKGDVPKEGGRDHEHVPAAAGAAE
EPTPVCVSATSDPRYSRPGEPEEECDDGRAGIDKNIKE
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaaccaggaaaacgatggacggcaatacggcagcggcgcatgtcgcctacgcc
ctgagcgagacggcggccatctatccgatcaccccttcctcgaccatgggggaagtggcg
gacgagtgggcggcggagggacgcaagaacatcttcggccagaccctgaacatcaaggaa
ctgcagtccgaggcgggtgcggcgggcgccgtgcacggctcgctggcggcgggtgccctc
accaccaccttcaccgcctcgcaggggctgctgctgatgctccccaacatgtacaagatc
gcgggcgagcagctcccgggggtgttccacgtctcggcccgcgccatcgccacccacgcc
ctctccatcttcggcgaccatcaggacgtcatggccgcgcgcccaaccggcttcgccatg
ctctgctcctgctcggtccaggaggtgatggacctcgccctggtggcgcacctcgccgcc
ctggaagggagcctccccttcctgcacttcttcgacggcttccggacctcgcacgaggtg
cagaagatcgaggtgatcggttacgaggagatggcccgactggtcaattacgagaagctg
gccgcgttccgcaggaaggccatgaacccggagcacccggaactgcggggcaccgcccag
aatcccgacatctatttccagggccgtgagcgcgccaaccccttctaccaggcgctgccg
cagatcgtgacggccaccatggagcaggtggggcagctcaccgggcggcagtaccggctc
ttcgactacgtcggtcacgccgaggcggaccgggtcatcgtcaccatgggttcctcctgc
gagaccgcggaggaggtggtgcagtaccttaacggaaaaggggagaaggtggggctggtc
aaggtgcggctattccgcccgttcgcctcggacgcccttttctccgccatccccccttcg
gcccggaagatcacggtgctcgaccgcaccaaggagccgggttccctgggcgagccgctc
taccaggacgtctgcaccgcctttctcgagcggggcggcgagatcccggaactctacgcc
gggcgctacgggcttggatcgaaggaattccggccggtgcacgtgaagagcatcttcgaa
aacatgaacggccgccccggcaggcgccacttcaccgtcggcatcaccgacgacgtgagc
gacagctcgctccccgcggaggggaccctctcgaccaccccggaggggaccatccagtgc
cgcttctgggggatgggggccgacggcaccgtcggggccaacaaggcggcgatcaagatc
atcggcgacaacaccgacctctacgtccaggcctacttctcctacgattccaagaagtcg
ggggggatcaccgtctcgcacctgcgcttcggggagagcccgatccagtccacctacctc
gtggacgcggccgatttcatctcctgccagaaggccccctacgtgcagatctacgacctg
ctggaggggatcaaggagggtgggaccttcctattgaactccccgtggaacagcgtggag
gcgatggaggccaacctcccggccaccatgcgccgggccatcgcacggaagaaggtccgc
ctctacaacgtggacgccatcagcatcgcccagtccgccgggctcggcgggcgcatcaac
atgatcatgcagaccgccttcttcaagctgtccggggtgctccccttcgagcgcgcggtt
gaacttctgaaggactcgatccgcaaggagtacggccgcaagggggaccaggtggtcgac
atgaacctttcggcggtcgacctcgccgtggagagcctggtcgagataccctatcccgac
tcctggcgcgaggccgacgaccggcacggcaccgacttccgcctcaaccagcagatgccc
ggctacatgcgcgacatggtgttcccgatcctgcgccagaagggggacgacctccctgtt
tcctccttcacgcccgacggggtcttccccttctccaccgcgcgctatgagaaacgcggc
gtcgccatcaacgtccccgagtggatcaaggaaaactgcatccagtgcaaccagtgcgcc
tacatctgcccgcacgccaccatccgcccctttgtggccaccgacggcgaactggccggc
gcaccgggcacctaccagaccatcccggtcaacgcgagggaactgaaggggatgggcttc
cggatccaggtctacccgctcgactgcatggggtgcggcaactgcgccgacatctgcccc
gccaaggttcccgcgctggtcatgaagccgatcgacacccaagccgcggtgcaggaggag
aaccgcaagttcgccgagaccctctccccgaaagggcacctggtgaagcggaccacggtg
atcgggagccagttccagcagccgcttctggagttctccggcgcctgctccggctgcggc
gagaccccgtacgcccggatcatcacccagctcttcggggaacggatgatgatcgccaac
gccaccggctgcagctccatctggggcgcctcggccccggtctccccctactgcgccaac
gccgaagggcacggcccggcgtggaacaactcgctcttcgaagacgccgccgaattcggg
ttcggctaccacatggccgtgtcgcagcgcaggagcctcctggccgaccaggtgcgccgc
gccgtgcaccacctgcccgagggggagctgagggaagagctcgccgcctggctcgcgggg
atgatggacccggaactctcacggcgccacggcgaccggctgaaggagctcctcccgaaa
gccggggacaacgagctgctgcagggaatcgccgcatcggcggacctcttcaccaagaag
tccatctggatctacggcggcgacggctgggcctacgacatcggcttcggcggcctggac
cacgtcatctccaccggcgaggacgtgaacctcctggtgatggacaccgagctctactcc
aataccggcggccagtgttccaaggcgacccagctgggcgccatcgcccgtttcgccgct
gccggcaagaggacatccaagaaggacctcgggcgcatggccatgacctacggctacgtc
tacgtcgcctcgatcgccatcggcgccgacaagaatcagaccctgagggcgatcacggag
gccgaggcgtaccccgggccgtcgctcatcatcgcgtactccacctgcatcaaccaggga
ctcagaaaggggatggggaaatcgatcgaggagagccagctcgcggtgaaatgcggctac
tggccgctgtaccgctacaacccgcttttgaagctggaagggaagaacccgttcatcctg
gaatccaagaagcccgacgggtcgctttccgaattcctctccggcgaggtgcgcttccag
gccctggaaaagcagaacccggaggtggcccaaatgctgcgcaagcagatggaaaaggag
gccatggagcgcttccggatgttccgggacatggctgactggcagccgagcaagggggac
gttcccaaagaggggggaagggatcacgaacacgtccccgcggccgcgggagccgccgag
gaaccgaccccggtctgcgtcagcgcgaccagcgacccgcgctacagccgccccggcgaa
cccgaggaggagtgcgacgacggccgcgccgggatcgacaagaacatcaaggaatga
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