Geodermatophilus obscurus: Gobs_1101
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Entry
Gobs_1101 CDS
T01163
Name
(GenBank) Fibronectin type III domain protein
KO
K20276
large repetitive protein
Organism
gob
Geodermatophilus obscurus
Pathway
gob02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Gobs_1101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGI_lyase
fn3
DUF4998
DUF4959
ASTN1_2_fn3
Big_13
Motif
Other DBs
NCBI-ProteinID:
ADB73860
UniProt:
D2S9Z7
LinkDB
All DBs
Position
1159939..1164327
Genome browser
AA seq
1462 aa
AA seq
DB search
MRDVGAAQRAAGRSRSRLLRLLAVVLAVLTVALGGQPVPAPRLDTVSTQDPAPPESVVVT
PADRALAVSWSASAETATSGYQVFVNGETQPRVTTNASTRTATLTELVNGQQYTITVRTV
TTGTVLLIPTTYVGQPSGPVPGTPRDTVAPAAPTGVSAARGDGRVTLSWTANSADHDADG
YRVLRDGVDVSRLLAGRATAGWTDTGLLNDRTYVYTVQTHDTSDNWSASSAPAVSATPTD
LTAPAAPTGLVGGRGDGRAGLSWTANTEPDLASYRVLRDGVEVATVTGTTHLDPGLVNDR
TYTYTLVAVDGHGNRSAPSAAVQVTPTDLTPPAAPTGLTAVRGDGQVTLSWTANAEPDLA
SYRVLRDGVEVATVSGATTYTDTRLVDDTTYRYTLAAVDTHGNRSTSSAAVTATPHELNA
PAPPTGVAATASDRRVDLSWTANGETDLAAYRVLRDGAVLATVTGATTYTDTAVVNDTTY
GYALVAVDTHDNASAPSETVRATPADRTAPARPTGFTATRGDGRVDLTWTANGETDLAAY
RVLRDGAVLATVTGATTYTDTAVVNDTTYGYALVAVDTSGNVSAAATASATPTDLTPPAA
PRGVTAVESGGRVSLSWTANAEPDLAGYVVLRDGAEIASVAGTTHVDGSPVDGAAHSYAV
VAVDTHGNRSASSTAATVAPADRSAPAAPTGLVATAGDGRVALSWTANTEPDLAGYVLLR
DGVQIATPIGTTYTDPGLVNDRSYAYALVAVDAGGNRSDAATASATPTDLTPPARPTGFT
AVPGEGRVTLTWTANTEPDLAGYVLLRDGVEVATPTGTTYTDPGLVNDRSYAYALVAVDA
RGNRSASATAGATPVDLPPAVPEGFTAVGGDGEVALTWTANTEPDLAGYVLLRDGVQIAT
PTGTTYTDRRLVNDRSYAYALVAVDAGGNRSDPATASATPADLTPPPAPTGVAAVPGNRQ
AELRWDAGGADVVEHRVLAADGSTVATVPAPGTSGTVTGLANDTTYAFTVVAVDAAGNVS
ARSAAVSVTPAYAVVPAEGAGESGGVAASSDGRFVVVGTRARLEPSDTNTAYELYVVDRT
AGTRTRIAPLPATATGAGDATNTSVPAVSDDGRSVVLATTAALDPRDTNGLADVYRFDVA
ARSWTLVSAPQGGTASPSVAGTVLQPAASVYATGPSVAVSGDGDLVLFYSARADLVAGDS
NNRVDVFAKRLSDGTVTRVSTTTTGGELSGPATGPALALTPDGRFAVFGADSASGVVAHR
KTLSGAGAGELRVVSQVTTSTGRMLPFAVYRDTGDLAVSDDGRYVALVTSNRVTTNFPAQ
TWSTGLAYRVDTVTGAVVPLGTGQTTVWEHQVELDPTGRYAYYSTAAAALPADTNGHTDH
YRRDLDGGVAGPLVLVTADASGRPTTGPTGAITPAEYGRLLAVTGDRVLVTTSQPLTASD
VNRLRDLYTKDLRTGAVGVGLG
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgcgggacgtcggcgctgctcagcgggcggccgggcgctcccggagccgcctgctgcgg
ctgctggccgtcgtcctcgccgtgctgaccgtggcgctgggcgggcagcccgtgccggca
ccgcggctggacacggtcagcacccaggacccggcaccgccggagagcgtcgtggtgacc
ccggccgaccgcgcgctcgccgtctcctggtccgcgtcggccgagaccgcgacgagcggg
taccaggtcttcgtgaacggggagacccagccgcgggtcacgacgaacgcctccaccagg
accgcgaccctgaccgaactggtgaacggtcagcagtacacgatcaccgtccggaccgtg
acgacggggacggtcctgctgatccccaccacgtacgtgggccagcccagcggccccgtc
cccggcacgccgcgggacaccgtcgcaccggccgcccccactggggtgagcgctgcccgc
ggcgatggccgggtcacgctgtcctggacggccaacagtgccgaccacgatgcggacggc
taccgcgtgctccgcgacggcgtcgacgtcagccgcctgctcgccgggcgcgctaccgcc
ggctggaccgacaccgggctgctcaacgaccgcacctacgtctacacggtgcagacgcac
gacacgtcggacaactggtcggcctcctcggcgcccgcggtcagcgcgacgccgaccgac
ctcaccgcgcccgcggcgccgaccggcctcgtcggcggccggggggacggccgggccggc
ctgtcctggacggcgaacaccgagcccgacctggcctcctaccgggtgctgcgcgacggc
gtcgaggtcgccacggtcaccggcacgacgcacctggaccccgggctggtcaacgaccgg
acgtacacgtacacgctggtcgccgtcgacggccacgggaaccggtcggcgccctcggcc
gcggtccaggtcacgcccaccgacctcaccccgccggccgcgcccaccgggctgaccgcc
gtccgcggcgacggccaggtgaccctctcctggacggcgaacgccgagcccgacctggcc
tcctaccgggtgctgcgcgacggcgtcgaggtcgccaccgtcagcggcgcgacgacgtac
accgacacccggctggtcgacgacaccacctaccgctacacgctggccgcggtggacacc
cacggcaaccggtcgacctcgtcggccgcggtgaccgcgaccccgcacgagctcaacgcc
ccggcgccgcccaccggcgtggccgccaccgcctccgaccggcgggtcgacctgtcgtgg
acggcgaacggcgagaccgacctggccgcctaccgggtgctgcgcgacggcgccgtcctg
gccacggtgaccggcgcgacgacctacaccgacaccgccgtggtcaacgacaccacctac
ggctacgcgctggtcgccgtcgacacccacgacaacgcctccgccccgtcggagacggtg
cgcgcgacgcccgcggaccgcaccgccccggcccggccgaccggcttcaccgccacccgc
ggcgacgggcgggtcgacctcacctggacggcgaacggcgagaccgacctggccgcctac
cgggtgctgcgcgacggcgccgtcctggccacggtgaccggcgcgacgacctacaccgac
accgccgtggtcaacgacaccacctatggctacgcgctggtcgccgtcgacacgtccggc
aacgtctccgccgccgcgacggcgtcggccacgcccaccgacctcaccccgccggccgcg
ccccggggcgtgaccgcggtggagagcggtggccgggtcagcctctcgtggacggcgaac
gccgagcccgacctcgccggctacgtcgtgctgcgcgacggcgcggagatcgcgagcgtc
gcggggacgacccacgtcgacggcagtcccgtcgacggcgccgcccacagctacgcggtg
gtcgccgtcgacacccacggcaaccggtcggcctcctccaccgcagcgacggtggccccg
gcggaccggtcggcgccggccgcacccaccgggctggtcgccaccgccggcgacgggcgg
gtcgcgctctcctggacggcgaacaccgagccggacctggccgggtacgtgctgctgcgc
gacggggtgcagatcgccaccccgatcggcacgacgtacaccgatcccgggctggtcaac
gaccgcagctacgcctacgcgctggtcgccgtggacgccggcggcaaccgctccgacgcc
gcgaccgcgagcgccacccccaccgacctcaccccgccggcccggccgaccgggttcacc
gccgtgccgggcgaggggcgggtcacgctgacctggacggcgaacaccgagcccgacctg
gccgggtacgtgctgctgcgcgacggggtggaagtcgccaccccgaccggcacgacgtac
accgatcccgggctggtcaacgaccgcagctacgcctacgcgctggtcgcggtggacgcc
cgcggcaaccgctccgcctccgcgacggccggcgccacgcccgtcgacctccccccggcc
gtaccggaggggttcactgccgtcggcggcgacggggaggtcgcgctcacctggacggcg
aacaccgagcccgacctggccgggtacgtgctgctgcgcgacggggtgcagatcgccacc
ccgaccgggaccacctacaccgatcgcaggctggtcaacgaccgcagctacgcctacgcg
ctggtcgccgtggacgccggcggcaaccgctccgaccccgcgaccgcgagcgccaccccg
gccgacctcaccccgccgccggcgccgaccggcgtggccgccgtcccggggaaccggcag
gccgagctgcggtgggacgccgggggcgccgacgtcgtcgagcaccgggtgctggccgcc
gacgggagcaccgtcgccaccgtgccggcgccggggacctcgggaacggtgaccggcctg
gccaacgacacgacgtacgcgttcaccgtcgtggcggtcgacgccgcgggcaacgtctcg
gcgcgctccgccgcggtgtcggtgaccccggcctacgccgtcgtcccggccgagggggcg
ggggagagcggcggcgtggccgcgagcagcgacggccggttcgtcgtcgtcggcacccgc
gcccgcctcgagccgtcggacaccaacaccgcctacgagctgtacgtcgtcgaccgcacc
gccggcacccggacgcggatcgccccgctgccggcgaccgccaccggcgcgggcgacgcg
accaacaccagcgtcccggcggtcagcgacgacgggcgctccgtcgtcctggccacgacc
gcggccctggacccgcgcgacaccaacgggctggccgacgtctaccggttcgacgtcgcc
gcccgcagctggaccctggtgagcgcccctcagggcggcaccgcctccccgtcggtggcc
ggcaccgtgctgcagcccgcggcgtcggtctacgccaccggcccgtcggtggcggtgtcg
ggcgacggcgacctggtgctcttctactcggcgcgggcggacctcgtcgccggcgacagc
aacaaccgggtcgacgtcttcgccaagcggctctccgacgggacggtcacccgggtctcc
acgaccaccaccggcggcgagctcagcggccccgccacgggcccggccctggcgctgacc
ccggacggccggttcgccgtcttcggcgccgacagcgcctccggcgtggtcgcccaccgc
aagacgctgtccggggcgggcgcgggggagctgcgggtggtctcccaggtcaccacctcc
accggccggatgctcccgttcgccgtctaccgcgacaccggcgacctggcggtcagcgac
gacgggcgctacgtcgccctggtcaccagcaaccgcgtcaccacgaacttccccgcgcag
acctggtcgaccgggctggcgtaccgcgtggacaccgtcaccggcgccgtcgtccctctg
gggacggggcagacgacggtgtgggagcaccaggtcgagctcgacccgaccggccgctac
gcctactactccaccgccgcggccgcgctgccggccgacaccaacgggcacaccgaccac
taccggcgcgacctcgacggcggcgtcgccgggccgctcgtgctggtgaccgccgacgcc
tccgggcggcccaccaccggccccaccggcgcgatcacgccggccgagtacgggcggctg
ctggcggtcaccggcgaccgggtgctggtgacgacgtcgcagccgctgaccgcgtccgac
gtcaaccggctgcgcgacctctacaccaaggacctgcggaccggtgccgtgggtgtgggc
ctgggctga
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