Gordonia sp. YC-JH1: CXX93_18080
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Entry
CXX93_18080 CDS
T05256
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CXX93_18080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goc03400
]
CXX93_18080
Enzymes [BR:
goc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CXX93_18080
DNA repair and recombination proteins [BR:
goc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CXX93_18080
Prokaryotic type
CXX93_18080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
AUH70501
LinkDB
All DBs
Position
3898943..3899596
Genome browser
AA seq
217 aa
AA seq
DB search
MESLVFAMSTETNRHRASQVDPAHAGTAPEPTILAAARSLLNRVLVGHGVSVRITEVEAY
NGPDDPASHAFTRTPRSEIMYGPPNRLYVYQIHTHHCANVVTSPEGQGSAVLIRAGAVID
GVQAARDRRGGVAEHLLARGPGNLTRALGITKADLDTDLLDPVGVHLLPADPASDPTAGG
HVIAGPRVGVRLAADRPWRFWIDGEPSVSAYRRHPRA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggagtcactggtctttgccatgagtacagagactaaccgccaccgcgcgtcacaggta
gatccggcccacgccgggacggcacccgagccgacgatcctcgcggcggcgcggtcgctc
ctgaaccgtgtcctggtggggcacggcgtgtcggtgcgaatcaccgaagtggaggcctac
aacgggcccgacgaccccgcttcgcacgcgttcacccggacgccgcggtcggagatcatg
tacggtccgccgaaccgcctgtacgtgtatcagatccacacccaccactgcgcgaacgtg
gtcaccagtccggaggggcagggctcggcggtgctgatccgagccggcgcggtgatcgac
ggagtgcaggcggcccgcgaccgccgcggaggcgtcgccgagcatctcctcgcacgcggc
ccgggcaatctcacccgcgcgctcggaatcaccaaagccgacctcgacaccgatctgctc
gatccggtcggcgtgcacctgctgcccgccgacccggcgtcggatccgaccgccggcggg
cacgtgatcgccgggccgcgcgtgggcgtccggctcgccgccgaccgaccgtggcggttc
tggatcgacggcgagccgtcggtgtcggcgtaccggcggcatccacgggcctga
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