Gordonia phthalatica: ACH46_07170
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Entry
ACH46_07170 CDS
T04097
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
goq
Gordonia phthalatica
Pathway
goq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
goq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACH46_07170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
goq03021
]
ACH46_07170
03019 Messenger RNA biogenesis [BR:
goq03019
]
ACH46_07170
Transcription machinery [BR:
goq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACH46_07170
Messenger RNA biogenesis [BR:
goq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACH46_07170
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
Motif
Other DBs
NCBI-ProteinID:
ALG84325
UniProt:
A0A0N9N2A4
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All DBs
Position
1537189..1539156
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AA seq
655 aa
AA seq
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MTETDVQAPKRARTGLSAMLLPELRALAGELGIKGTSGMRKGDLIDVIRAHQHGGAAKAA
APKAEKADKPAVAKQQETKPASSEPAGEAPAAAKVAEKPTEQKTTAPTSEKSADDAKADA
DTRREGTANAGGRQNREQTADGEGGGNRRNRQRNRDNQNRDNQNRDDQRAQGQNDQESGD
KSGDDSTKTQGNQNRDNQNQGNQGQGRNNQGQGNQQKQGQNQGGGQNNQNRDNNRDEDGE
GGGRRSGRRFRERRRGRDRDGGNQGEPQVNEGDVLKPVAGILDVLDNYAFVRTSGYLAGP
DDVYVSMNLVRRNGLRRGDAITGAVKVPRDGDNPNNQRQKFNPLVRLDTVNGTDVEAARK
RPDFTKLTPLYPNQRLRLETTAERLSTRVIDLIMPIGKGQRALIVSPPKAGKTTILQDIA
NAITTNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTSVAELAIERAKR
LVESGMDVVVLLDSITRLGRAYNNASPASGRILSGGVDSQALYPPKRFLGAARNIENGGS
LTIIASALVETGSTGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNLSSTRKDELLL
SPDEFAIVHKLRRLLSGLDSQAAIDLLISQLKKTRSNVEFLMQVSKNAPGVAGDN
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaacggatgtgcaggcaccgaagcgggcccgtaccggactttccgccatgctg
ctgcccgagcttcgtgcgctggcaggcgagctcggcatcaagggcacctcgggcatgcgc
aagggggacctgatcgacgtcatccgagcacatcagcacggcggcgcagcgaaggcagca
gcgccgaaggcggagaaggccgacaagcctgcggtcgcgaaacagcaggagacgaagcct
gcgtccagcgaacctgcaggtgaggctcccgcggccgcgaaggtcgccgagaagccgacc
gaacagaagaccaccgcgccgacgtcggagaagagcgccgacgacgccaaggccgacgcc
gacaccaggcgtgaaggcaccgccaacgccggtggccgtcagaaccgcgagcagaccgca
gacggcgagggcggcggcaaccgccgcaaccgtcagcgcaaccgcgacaaccagaaccgc
gacaaccagaatcgcgatgaccagcgcgcccaagggcagaacgaccaggagtccggcgac
aagtcgggcgacgacagcaccaagacccagggcaaccagaaccgcgacaaccagaaccag
ggcaaccagggtcagggccggaacaaccaggggcagggcaaccagcagaagcagggccag
aaccagggcggcggccagaacaaccagaaccgcgacaacaaccgcgacgaggacggagaa
ggcggcggccgccggagcggacgtcgattccgcgagcgtcgccgcgggcgtgaccgtgac
ggcggcaaccagggcgaaccccaggtcaacgagggtgacgtcctgaagccggtcgccggc
atcctcgacgtcctcgacaactacgccttcgtccgcacctccggatacctggcgggcccc
gacgacgtttacgtctcgatgaacctggtgcgccgcaacggactccgccgcggcgacgcg
atcaccggtgccgtcaaggtgccgcgcgacggcgacaaccccaacaaccagcggcagaag
ttcaacccgctggtccgcctggacaccgtcaacggcaccgacgtcgaggccgcacgcaag
cgccccgacttcaccaagctgacgccgctctacccgaaccagcggctgcgtctggagacc
accgccgagcgactgtcgacccgcgtcatcgacctgatcatgccgatcggcaagggccag
cgcgccctcatcgtctcgccgccgaaggccggtaagacgacgatcctgcaggacatcgcc
aacgcgatcaccaccaacaaccccgaatgccacctgatggtggtcctggtggacgagcgt
cccgaagaagtcaccgacatgcagcgcagtgtgaagggcgaggtcatcgcctccaccttc
gaccgcccgccgtcggaccacaccagcgtcgccgaactcgccatcgagcgggccaagcgt
ctcgtcgagtccggcatggacgtcgtggtgctcctcgactcgatcacccgcctcggccgc
gcgtacaacaacgcgtcgcctgcgtcgggccgcatcctgtccggtggtgtcgactcgcag
gcgctgtacccgccgaagcggttcctcggcgccgcacgcaacatcgagaacggcggctcg
ctgaccatcatcgcgtccgcactcgtcgagaccggctccaccggcgacaccgtcatcttc
gaggagttcaagggcaccggcaacgccgagctcaagctcgatcgcaagatctccgaacga
cgcgtcttcccggccgtcgacgtcaacctttcgagcacccgcaaggatgagctcctgctc
tcgcccgacgagttcgcgatcgtccacaagctgcgtcgactcctctcgggcctcgactcg
caggccgccatcgacctgctgatctcgcagctcaagaagacgcgcagcaatgtcgagttt
ctgatgcaggtcagcaagaacgcaccgggcgtggcgggggacaactga
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