Gamma proteobacterium HdN1: HDN1F_05860
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Entry
HDN1F_05860 CDS
T01300
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00020
Citrate cycle (TCA cycle)
gpb00190
Oxidative phosphorylation
gpb00650
Butanoate metabolism
gpb01100
Metabolic pathways
gpb01110
Biosynthesis of secondary metabolites
gpb01120
Microbial metabolism in diverse environments
gpb01200
Carbon metabolism
Module
gpb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gpb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gpb_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HDN1F_05860 (sdhA)
00650 Butanoate metabolism
HDN1F_05860 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
HDN1F_05860 (sdhA)
Enzymes [BR:
gpb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HDN1F_05860 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
GIDA
DAO
FAD_binding_3
HI0933_like
Thi4
HrcA
Pyr_redox_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
CBL44169
UniProt:
E1VH77
LinkDB
All DBs
Position
730989..732761
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AA seq
590 aa
AA seq
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MTSIRTMTYDAIIIGGGGAGMRAALQLSQSGYRTACITKVFPTRSHTVSAQGGITCAIAS
NDPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTEAGRIYQRP
FGGQSKGPDNPTQAARTCAAADRTGHALLHTLYQNNLKNKTTFLIEWYAVDLVKNQDGAV
VGVIAINIETGETVFIQSQATVLATGGAGRIFSSTTNALINTGDGIGMALRAGFPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINAQGERFMERYAPNAKDLASRDVVARAMVKEI
LAGNGCGPEKDHVMLKLDHLGEEVLHKRLPGICELSKTFAHVDPVTAPIPVVPTCHYMMG
GVPTNIHGQAIAQDANGNDRIIDGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEHALKEGIEHRPASQSDLDASFSRLNSLNTRTKGEPVAKLRKELQQCMQNYFGVFRTGE
FMEKGIKVLADLRDRVENVAITDKSQAFNTDRIEALELQNLFEVAEATAIAADERKESRG
AHAREDYEERDDKNWLCHSMYFPGEKRVSKRAVNFAPKTVPTFEPKKRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgactagcattcgtacaatgacttatgacgccatcatcattggtggcggcggcgccggc
atgcgcgctgcactgcaactttcgcaatccggctacagaaccgcctgcatcaccaaggtg
ttcccgacgcgttcgcacaccgtatcggctcagggtgggattacctgcgcaatcgcctcc
aacgatccaaacgatgactggcgctggcacatgtacgacaccgtcaaaggctccgactac
atcggtgaccaagacgcaatcgaatacatgtgttccgtaggcccagaagcagtgtttgag
cttgaacacatgggtttgccattctcacgcaccgaagcgggccggatttatcaacgcccc
tttggtggccagtccaagggcccagacaaccccacgcaagcggctcgtacctgtgccgcc
gctgaccgtaccggccacgcgctgctgcacaccctgtaccagaacaacctgaagaacaaa
accaccttcttgattgagtggtatgcggttgatctggtaaaaaaccaagacggtgccgtt
gtgggcgtgatcgccatcaacatcgaaaccggcgaaaccgtattcatccaatcgcaagcc
accgtcctcgccaccggcggcgctggccgcatcttctcctctaccaccaacgccttgatc
aatacgggtgatgggatcggcatggcgctgcgcgcaggcttccctgtgcaggatatcgaa
atgtggcaattccaccccaccggtatcgccggcgcgggcgtgctcgtcactgaaggctgc
cgtggtgaaggcggctacctgatcaacgcccaaggcgagcgcttcatggaacgctatgcg
cccaacgcgaaagaccttgccagccgcgacgtcgttgcacgcgcaatggtcaaagagatc
ctcgctggcaacggttgcggccctgaaaaagatcacgtaatgctcaaactcgaccatttg
ggcgaagaagtactgcacaagcgtttgccagggatttgtgagctctccaaaactttcgcg
catgtcgatcccgttaccgcgccgatcccagtcgtgcctacctgccactatatgatgggc
ggcgtcccgaccaacatccacggccaagccattgcgcaggacgcaaacggcaacgacaga
atcatcgacggtctgtttgccgtaggcgaagtcgcttgcgtatccgtacatggcgcaaac
cgcttgggcggtaactcgctgctcgacctcgtcgtgttcggccgcgcagccggtttgcac
cttgagcatgctctcaaggaaggcattgagcatcgcccagcgagtcaaagcgacctagat
gcatcgttctcgcgcttgaatagcctgaacacccgcaccaagggcgagcctgttgccaaa
ctgcgtaaagagctgcagcagtgcatgcagaactactttggcgtattccgcaccggcgaa
ttcatggaaaaaggcatcaaagtgctggcggacctgcgtgatcgcgtcgaaaacgtcgcc
attaccgataagagccaagcattcaataccgatcgcattgaagcgctggaactgcaaaac
ctgtttgaagtggcggaagccacagcgattgccgccgacgagcgcaaagaatcacgcggc
gcccacgcccgcgaagattacgaggagcgcgacgacaagaactggttgtgccactccatg
tactttcctggggaaaaacgcgtatccaaacgggcggtcaacttcgcaccgaaaaccgtt
cctacgtttgaacccaaaaaacgcacgtattaa
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