Gamma proteobacterium HdN1: HDN1F_15640
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Entry
HDN1F_15640 CDS
T01300
Symbol
sucD
Name
(GenBank) Succinyl-CoA ligase, alpha subunit
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00020
Citrate cycle (TCA cycle)
gpb00640
Propanoate metabolism
gpb00660
C5-Branched dibasic acid metabolism
gpb01100
Metabolic pathways
gpb01110
Biosynthesis of secondary metabolites
gpb01120
Microbial metabolism in diverse environments
gpb01200
Carbon metabolism
Module
gpb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gpb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HDN1F_15640 (sucD)
00640 Propanoate metabolism
HDN1F_15640 (sucD)
00660 C5-Branched dibasic acid metabolism
HDN1F_15640 (sucD)
Enzymes [BR:
gpb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
HDN1F_15640 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Herpes_ICP4_C
Motif
Other DBs
NCBI-ProteinID:
CBL45147
UniProt:
E1VK05
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All DBs
Position
1991388..1992260
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AA seq
290 aa
AA seq
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MSVLINKDTKVICQGLTGSQGTMHSQQAMEYGTKMVGGVTPGKGGTHHIGLPVFNTVAEA
REATGADASVIYVPAAFCKDSILEAADAGVPLIVCITEGIPALDMLYVKEYVMAKGLRLI
GPNCPGIITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYECVAQTTVLGFGQSTCIGIGG
DPIPGTTFIDALKLFQDDPQTEAIIMVGEIGGSAEEEAAAFIKEYVKKPMVSYIAGVTAP
PGKRMGHAGAIIAGGKGTADEKFAALSDAGVAVCRNPAEIGKTLKEITGW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtattgattaataaagacaccaaggtaatctgccagggcctgactggttcacaa
ggcacgatgcacagccagcaggcaatggaatacggcactaaaatggttggcggagtaacg
ccaggcaaaggtggcacccaccatattggcctgcctgtatttaacaccgtagcagaagcg
cgtgaagccacgggtgccgacgcatcggtaatctatgttcccgctgcgttctgcaaagac
tcgatccttgaagcggcagacgcgggcgttccgttgatcgtgtgcattaccgaaggcatt
cctgcactggatatgctgtacgtgaaagaatatgtgatggccaaaggcttgcgcctgatc
gggccgaactgcccaggaattatcactccaggcgagtgcaaaatcggcatcatgcccggc
catattcacctgccaggcaaagtcggcatcgtgtcgcgttccggtacgttgacgtatgaa
tgcgttgcgcaaacgacggtcctcggctttggccagagcacctgcattggcatcggcggt
gacccaattccaggtaccacctttatcgacgcactcaaattgttccaagacgacccacaa
accgaagcgatcatcatggtcggcgaaatcggtggttctgccgaggaagaagctgcggcg
ttcatcaaggaatacgtcaagaagccaatggtaagctacattgcaggcgttactgcacct
cccggcaagcgtatgggccacgcgggtgccatcattgcaggcggaaaaggcactgcagac
gagaagtttgctgcactgtctgatgctggcgttgcggtttgccgcaaccctgcagaaatt
ggcaagaccctcaaagaaattactggctggtaa
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