Gamma proteobacterium HdN1: HDN1F_19770
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Entry
HDN1F_19770 CDS
T01300
Name
(GenBank) Propionyl-CoA carboxylase
KO
K01969
3-methylcrotonyl-CoA carboxylase beta subunit [EC:
6.4.1.4
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00280
Valine, leucine and isoleucine degradation
gpb01100
Metabolic pathways
Module
gpb_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HDN1F_19770
Enzymes [BR:
gpb01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
HDN1F_19770
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Carboxyl_trans
Cadherin_2
Motif
Other DBs
NCBI-ProteinID:
CBL45560
UniProt:
E1VL68
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Position
2461077..2462675
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AA seq
532 aa
AA seq
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MSKIASTVAKNTETYQQNYAWHSALQTELRQRIARVVSGDRDHLIERHRKRGKLLPRERI
DLLVDPCTPFLELSTLAAWEQYGGRVHSAGVVTGIGIVHGQFCMIVANDSTVKGGAYYPE
TVKKHIRAQEIAEQHRLPCIYLVDCGGAYLHEWDRVFPDKDHFGNIFFRQCNLSAQGLPQ
LAAVFGVSTAGAAYIPALSDEVVMVRGNATIHLGGPSIVKVAINEDISPEELGGAEMHTT
VSGVSDYIAETEQEALARMRDIVAGLNRKATCYQRTQPPREPAYPISELKGIVSKDFAQP
YDIREVIARLVDSSDFQEFKPQWGTSLICGTAHIQGYPVGILGNNGPLFSDASVKGAHFI
SLCEQRNIPLLFLHNVPGFMVGKAAEQGGISKHSAKLVYAMSCAKVPRFSVVIGGSYGAG
NYGMCGRGFQPNLMFAWPNSVVATMSADIGTNVVMELARTSISKKPTPESLAALDRETRA
MYAEKSSAYYATSRIWDDGIIEPEQTRDVLGLCLAMAATLPPQDERCYVYRM
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaattgcctccacggtggccaagaacaccgaaacctaccagcagaactacgct
tggcacagcgcgcttcagaccgagctgcgtcaacgcattgcgcgcgtagtttcaggcgac
agagatcatctgattgagcgtcaccggaaacgtggcaagctgctaccgcgtgaacgcatc
gacctgttagtagacccttgcacaccctttttagagctctctacactcgctgcgtgggag
caatacggtggacgggtccacagtgccggcgttgtgacaggcattggcatcgtacacggc
cagttctgcatgattgtggcaaacgattcaacggtaaaaggcggcgcctattacccagaa
acggtgaaaaaacacattcgcgcacaagagatcgccgaacagcaccgcctcccttgtatc
taccttgtggactgcggtggcgcgtacctgcacgaatgggatcgcgtgttccctgataaa
gaccactttggaaatatatttttccgccagtgcaatttatctgcgcaaggcttgccccag
ctcgcagcagtgtttggcgtaagtacagcaggtgccgcttatattcccgcactttccgac
gaagtggtaatggtgcgcggaaacgcaacgatccacctaggcggcccatcaattgtaaag
gttgcgatcaacgaagatatcagcccagaagaactcggcggtgcagaaatgcacaccacc
gtatccggggtttctgactacattgctgaaacggaacaagaagcccttgctcggatgcgc
gacatcgtggccgggctaaaccgaaaagcgacctgctatcagcgcacgcaaccgccccgt
gaacctgcctatccgatcagcgaattaaagggcatcgtcagcaaagattttgcgcagccc
tatgatatccgcgaagtaatcgcacgcttggtagattccagcgattttcaggaattcaag
ccgcagtggggcaccagcctcatctgtggaacggcgcatattcaaggctatcccgtcgga
attttagggaataacggcccactcttttctgatgcgtctgtcaaaggcgcgcactttatt
tctctctgcgagcaacgcaatattccgttactgtttttgcacaacgtccctggctttatg
gtgggcaaagcagcagagcaaggcggaatttccaagcacagcgcgaagctagtatatgcc
atgtcatgcgccaaagtgccacgctttagcgtcgttattggtggttcttatggggcagga
aactacggcatgtgcggccgtggctttcaaccgaatctgatgtttgcatggccaaactcc
gttgtggccaccatgagcgccgatatcggcacgaacgtcgttatggaacttgcgcgcacc
agcatctcgaagaagccgacaccagaatcgctcgcagcgttggatcgagaaactcgtgcc
atgtacgcagagaaaagcagcgcgtactatgcaacctcgcgaatttgggatgatggcatc
atcgaacccgagcagacgcgcgacgtgctcgggctctgccttgctatggcggccacgctg
ccaccgcaagacgagcgttgctacgtttatcgcatgtag
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