Gamma proteobacterium HdN1: HDN1F_20440
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Entry
HDN1F_20440 CDS
T01300
Symbol
trpS
Name
(GenBank) Tryptophanyl-tRNA synthetase, class Ib
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HDN1F_20440 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gpb01007
]
HDN1F_20440 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gpb03016
]
HDN1F_20440 (trpS)
Enzymes [BR:
gpb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
HDN1F_20440 (trpS)
Amino acid related enzymes [BR:
gpb01007
]
Aminoacyl-tRNA synthetase
Class I (G)
HDN1F_20440 (trpS)
Transfer RNA biogenesis [BR:
gpb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HDN1F_20440 (trpS)
Prokaryotic type
HDN1F_20440 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
DUF1687
Motif
Other DBs
NCBI-ProteinID:
CBL45627
UniProt:
E1VLD5
LinkDB
All DBs
Position
complement(2536252..2537271)
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AA seq
339 aa
AA seq
DB search
MTKQRYLTGITTTGTPHLGNYVGAIRPAIEASRNPEIESFYFLADYHALIKCFEPEKIRQ
SSREIAATWLALGLDTDHSTFYRQSDIPEIMELTWMLTCVTAKGLMNRAHAYKASVQENE
QSSENDPDKGITMGLFSYPILMSADILMFNAHKIPVGRDQIQHIEMARDIGQRFNYLFGE
QFVLPEAAVDDQVAVLAGLDGRKMSKSYGNTIPLFSSEKELKKLINRIKTNLKEPGEPKE
TSESALFEIWQAFATPDQIQYMRDAHANGIAWGQAKKELFELINEQLTEPRNRYQELMND
LGYIDEVLKKGAEKARAEAIPRLEKARASIGIARTISQS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacagcgttacctcaccggcatcacgaccaccggcaccccacacttgggtaac
tacgtcggcgcaatccgcccggcaatcgaagcttcgcgcaacccagaaatcgaatccttc
tacttcctcgccgattatcacgcgctcatcaaatgcttcgagccggaaaaaatccgtcag
agttcccgcgaaatcgccgccacttggcttgcactcggcttagacaccgatcacagcacc
ttctaccgccaatcagacattccagaaatcatggaattgacgtggatgcttacttgcgtc
accgccaagggcttaatgaatcgcgcgcacgcctacaaagcctctgtccaagaaaacgaa
caaagcagcgaaaacgaccccgacaaaggcattaccatggggttatttagctaccccatc
ctgatgagcgccgacattttgatgttcaacgctcacaaaatccccgtggggcgcgaccag
atccaacacatcgaaatggcccgcgacatcggccagcgcttcaactacctgtttggcgaa
caattcgtgctaccagaagccgccgtcgatgatcaagttgccgtgctcgcagggctagac
ggccgaaaaatgagcaagagctacggcaacaccatcccgctgttcagcagcgaaaaagag
ttaaaaaaactcatcaaccgcatcaaaaccaacctcaaagaacccggcgaacccaaagaa
acctccgaatccgccctctttgaaatctggcaagccttcgcaaccccagaccaaatccaa
tacatgcgcgacgcccacgcaaacggcatcgcatggggccaagcgaaaaaggaactcttt
gaactcatcaatgaacagctcaccgaaccgcgcaaccgctaccaagaactgatgaacgat
cttggttatattgatgaagtgctaaagaaaggcgcagaaaaagcccgcgcagaagcaatc
ccaaggcttgaaaaagcccgcgcctctatcggaatcgcgcgtaccatcagccaaagctag
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