Gamma proteobacterium HdN1: HDN1F_34230
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Entry
HDN1F_34230 CDS
T01300
Name
(GenBank) Putative acyl-CoA carboxylase alpha chain protein
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00280
Valine, leucine and isoleucine degradation
gpb01100
Metabolic pathways
Module
gpb_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HDN1F_34230
Enzymes [BR:
gpb01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
HDN1F_34230
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Biotin_lipoyl_2
Dala_Dala_lig_C
ATP-grasp
MCC_alpha_BT
HlyD_3
GCV_H
NQRA
GARS_A
RnfC_N
ATP-grasp_3
DUF2118
Motif
Other DBs
NCBI-ProteinID:
CBL47006
UniProt:
E1VQB4
LinkDB
All DBs
Position
complement(4157765..4159786)
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AA seq
673 aa
AA seq
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MTSSNRAIHKVLIANRGEIACRVIRTLRTMGIRSVAVYSEADRSAPHVQQADEAWFIGPA
PASESYLKMDTLLAVAKESGADAIHPGYGFLSENPQFAAACETAGIKFIGPSSRSISAMG
SKSAAKLIMEKAAVPLIPGYHGDNQGDAFLHQQADRIGYPLLIKAAFGGGGKGMRVVEAS
EHFLEALQSCRREGQASFGNPTVLLEKYLTQPRHVEIQVFCDQHGNGVYLHERDCSIQRR
HQKIIEEAPAPGLSSETRKAMGEAAVAAARAIDYEGAGTIEFLYDVDGRFYFMEMNTRLQ
VEHPVTEYITRQDLVEWQIRVARGETLPLAQAEIPLYGHAIEARICAESPDLEFRPSIGL
LTHFRTPNTHPDVRVDTGIEGGSEISMYYDPMVAKLIVHGATREQAIDRLLVALEQFQVL
GVETNINYLHRILSLPAFRNADLSTHFLQKEQSGIHDRLIQITPAYFAWAAAALLQSEQT
RSHATQQQAAQSSPWQNADGWQLNGAQQRRYTLKCGEQIETVTLTYRAEHYTASVGDEAA
FSFDARTQGGLLRVGGQKTITLPFHLDAKGITFFLSGKPLSFSRYQADYSNTEHADAGQL
QASMPGRIVSVLVSNGDQVEAGQTLLIMEAMKMEHTLRAPFDGIVTAVHYKVGDAVPEGA
ELVALEELAEPNS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaccagttcaaatagagccattcacaaagttttaatcgccaaccgcggcgaaattgca
tgtcgcgtcattcggacccttcgcactatggggatccgcagcgttgccgtgtactcggaa
gccgatcgcagtgcaccgcacgttcagcaagcagacgaggcatggtttatcggccctgca
cctgcctccgagtcctatctaaaaatggacaccctgcttgcagtcgccaaagaaagtggc
gcagatgcgatccacccaggctacggctttctctcggaaaacccacaatttgcggccgca
tgtgaaactgctggcatcaagtttattggccccagcagccgatccatttccgcaatgggt
tcaaaatcggccgccaagttgatcatggaaaaagctgcggttccgctgattcccggctac
catggcgacaaccaaggtgacgctttccttcatcagcaggccgaccgcattggctacccg
ctactaattaaagctgccttcggcggcggcggaaaaggaatgcgcgtggtggaagccagc
gaacactttctggaagccctgcaatcctgccgtcgtgaaggccaagcaagtttcggcaac
cccactgtattgctggaaaaatacctcacgcagccgcgccacgtggaaatccaagtgttc
tgcgaccagcacggaaacggcgtatatctgcacgaacgcgactgctcgatccagcgccgc
catcagaaaatcatcgaagaagcgcccgcacctggtctttcttccgagacacgcaaagcc
atgggcgaagctgccgttgccgccgctcgcgcaattgattacgaaggcgcaggaaccatt
gaatttctctacgacgtagatggccgattttatttcatggagatgaatacccgcctgcaa
gtggagcacccagtaacggaatatattacccgccaagatttggtggagtggcagattcgc
gtggcgcgtggcgaaacactaccgctcgctcaagccgaaattcctttgtacggccacgct
attgaggcgcgaatctgcgcagaatcgcccgatctggaatttcgcccctccattggcctg
ctcactcactttagaactcctaacactcaccctgatgtgcgcgtagataccggcattgaa
ggcggcagtgaaatcagtatgtattatgatccaatggtcgcaaagttgattgttcacggg
gcaacgcgcgaacaggccattgatcgcttgctggtagcgctggagcaatttcaggtgctg
ggcgtagagaccaatatcaactatctgcaccggatattgtcgctccctgcgtttcgaaat
gcggatttgagtactcattttctccagaaagaacaatcaggaattcacgatcgcctcatc
cagattacgcctgcctattttgcatgggcggctgcggcgctattgcagtctgaacagact
cgcagccacgcgacacaacagcaggccgcgcaaagcagcccgtggcaaaacgctgatggc
tggcagctcaacggcgctcaacaacgtcgttacacgctaaaatgcggcgagcagatcgaa
actgtcacgctcacgtatcgcgcagaacactacaccgcaagcgttggcgacgaagccgcc
tttagcttcgacgcgcgcacgcaaggcggattgctgcgagtgggtggacagaaaacaatc
accctccccttccatctggatgcaaaaggaatcacgttcttcctgagcggcaagccactg
tcgttttctcgctaccaggccgattattccaacaccgaacacgcagatgcaggccaattg
caagccagcatgccgggaagaatcgtatcggtacttgtatcaaacggcgatcaggtagaa
gctgggcaaactctgctaatcatggaagccatgaaaatggagcacaccctgcgcgcgccc
tttgacggtatcgtgaccgctgtgcattataaagttggcgatgcggtgccggaaggcgca
gaactggtcgcactggaagaacttgcagaacccaatagctaa
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